Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCRAQ6ISU1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 RNU6-818P-201ENST00000364837 108 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 RNU6-275P-201ENST00000364910 107 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 SNORA29-201ENST00000384183 140 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 RNU6-80P-201ENST00000384195 107 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 MIR513C-201ENST00000401352 84 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 HLFP1-201ENST00000402375 499 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 IFNA11P-201ENST00000446352 526 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 snoU109.2-201ENST00000459316 135 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC139453.3-201ENST00000493276 369 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC097462.2-201ENST00000504623 481 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 BTF3L4P4-201ENST00000506381 449 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 SNORD116-26-201ENST00000516006 96 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 CYCSP23-201ENST00000519781 313 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC112693.2-201ENST00000556538 232 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC106785.1-201ENST00000565935 262 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 MIR3939-201ENST00000582614 106 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 MIR4420-201ENST00000583944 77 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AC131238.1-201ENST00000617135 328 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AL365440.1-201ENST00000436135 2167 ntBASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCRAQ6ISU1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PTCRAQ6ISU1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 RNU6-178P-201ENST00000384631 104 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 MTHFD2P2-201ENST00000407725 247 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 BX323845.1-201ENST00000432417 179 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 RNU6-58P-201ENST00000517143 103 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 AC024614.2-201ENST00000577584 372 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 AC024153.1-201ENST00000603103 365 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 AC110491.1-201ENST00000562191 2010 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 AC107027.3-201ENST00000565095 3473 ntBASIC5.21□□□□□ -1.58
PTCRAQ6ISU1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 RNU6-1272P-201ENST00000362776 107 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 RNU5B-2P-201ENST00000363036 113 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 RNU5F-3P-201ENST00000363767 117 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SNORD115-8-201ENST00000363856 82 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SNORD113.2-201ENST00000364166 89 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SNORA72.2-201ENST00000365028 127 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SNORD115-38-201ENST00000365037 82 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 OR1L6-202ENST00000373684 1044 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 U8.10-201ENST00000384260 133 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 Y_RNA.595-201ENST00000410403 105 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 RNA5SP44-201ENST00000410446 133 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 RAB28P5-201ENST00000427490 651 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 AL356867.1-201ENST00000429623 299 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 RPL7AP61-201ENST00000443410 636 ntBASIC5.2□□□□□ -1.58
PTCRAQ6ISU1 SNORA84-201ENST00000459229 133 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms