Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MTND4P33-201ENST00000556706 766 ntBASIC2.57□□□□□ -2
RFC4P35249 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.57□□□□□ -2
RFC4P35249 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.57□□□□□ -2
RFC4P35249 MIR4781-201ENST00000585250 76 ntBASIC2.57□□□□□ -2
RFC4P35249 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.57□□□□□ -2
RFC4P35249 AL596327.1-201ENST00000603629 213 ntBASIC2.57□□□□□ -2
RFC4P35249 AL161729.4-201ENST00000604650 476 ntBASIC2.57□□□□□ -2
RFC4P35249 AC027449.1-201ENST00000608890 407 ntBASIC2.57□□□□□ -2
RFC4P35249 AC103710.4-201ENST00000609301 899 ntBASIC2.57□□□□□ -2
RFC4P35249 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
RFC4P35249 AC008498.1-201ENST00000613012 531 ntBASIC2.57□□□□□ -2
RFC4P35249 AL139418.1-201ENST00000613613 177 ntBASIC2.57□□□□□ -2
RFC4P35249 YWHAEP7-203ENST00000622054 312 ntBASIC2.57□□□□□ -2
RFC4P35249 AL391262.2-201ENST00000622466 494 ntBASIC2.57□□□□□ -2
RFC4P35249 MTND4P35-201ENST00000604257 1375 ntBASIC2.57□□□□□ -2
RFC4P35249 DDX43P2-201ENST00000604753 1354 ntBASIC2.57□□□□□ -2
RFC4P35249 ZNF876P-202ENST00000398732 1485 ntBASIC2.57□□□□□ -2
RFC4P35249 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFC4P35249 AC009902.3-201ENST00000606235 2172 ntBASIC2.56□□□□□ -2
RFC4P35249 RNU6-637P-201ENST00000384050 107 ntBASIC2.56□□□□□ -2
RFC4P35249 PIGPP2-201ENST00000411569 458 ntBASIC2.56□□□□□ -2
RFC4P35249 HMGB1P49-201ENST00000418882 569 ntBASIC2.56□□□□□ -2
RFC4P35249 AC008850.1-201ENST00000427546 362 ntBASIC2.56□□□□□ -2
RFC4P35249 TXNL1P1-201ENST00000429528 554 ntBASIC2.56□□□□□ -2
RFC4P35249 CR769776.1-201ENST00000441254 787 ntBASIC2.56□□□□□ -2
RFC4P35249 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.56□□□□□ -2
RFC4P35249 COX6CP12-201ENST00000446748 202 ntBASIC2.56□□□□□ -2
RFC4P35249 MTCO1P27-201ENST00000448269 226 ntBASIC2.56□□□□□ -2
RFC4P35249 PAXBP1P1-201ENST00000449315 447 ntBASIC2.56□□□□□ -2
RFC4P35249 USP9YP10-201ENST00000454868 628 ntBASIC2.56□□□□□ -2
RFC4P35249 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.56□□□□□ -2
RFC4P35249 AC105252.1-201ENST00000503089 286 ntBASIC2.56□□□□□ -2
RFC4P35249 RNU6-415P-201ENST00000516252 97 ntBASIC2.56□□□□□ -2
RFC4P35249 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.56□□□□□ -2
RFC4P35249 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.56□□□□□ -2
RFC4P35249 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.56□□□□□ -2
RFC4P35249 AC023824.2-201ENST00000566185 400 ntBASIC2.56□□□□□ -2
RFC4P35249 AC005951.2-201ENST00000576282 495 ntBASIC2.56□□□□□ -2
RFC4P35249 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.56□□□□□ -2
RFC4P35249 AC112220.3-201ENST00000605502 502 ntBASIC2.56□□□□□ -2
RFC4P35249 HMGB1P24-202ENST00000615653 685 ntBASIC2.56□□□□□ -2
RFC4P35249 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
RFC4P35249 RNU6-853P-201ENST00000364306 107 ntBASIC2.55□□□□□ -2
RFC4P35249 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
RFC4P35249 RNU1-39P-201ENST00000383897 165 ntBASIC2.55□□□□□ -2
RFC4P35249 SNORA17.3-201ENST00000391159 129 ntBASIC2.55□□□□□ -2
RFC4P35249 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
RFC4P35249 HMGB1P11-201ENST00000413899 637 ntBASIC2.55□□□□□ -2
RFC4P35249 PIGFP3-201ENST00000441918 722 ntBASIC2.55□□□□□ -2
RFC4P35249 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
RFC4P35249 AC073901.1-201ENST00000462471 408 ntBASIC2.55□□□□□ -2
RFC4P35249 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.55□□□□□ -2
RFC4P35249 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.55□□□□□ -2
RFC4P35249 AL391261.3-201ENST00000557194 520 ntBASIC2.55□□□□□ -2
RFC4P35249 AGGF1P5-201ENST00000567900 919 ntBASIC2.55□□□□□ -2
RFC4P35249 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.55□□□□□ -2
RFC4P35249 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
RFC4P35249 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RFC4P35249 AL356596.1-201ENST00000624230 379 ntBASIC2.55□□□□□ -2
RFC4P35249 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
RFC4P35249 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
RFC4P35249 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RFC4P35249 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFC4P35249 RNU6-157P-201ENST00000383957 107 ntBASIC2.54□□□□□ -2
RFC4P35249 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFC4P35249 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.54□□□□□ -2
RFC4P35249 AL008987.1-201ENST00000415528 237 ntBASIC2.54□□□□□ -2
RFC4P35249 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.54□□□□□ -2
RFC4P35249 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.54□□□□□ -2
RFC4P35249 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFC4P35249 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.54□□□□□ -2
RFC4P35249 AL591719.1-201ENST00000444669 744 ntBASIC2.54□□□□□ -2
RFC4P35249 CBWD4P-201ENST00000445695 655 ntBASIC2.54□□□□□ -2
RFC4P35249 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.54□□□□□ -2
RFC4P35249 AP000542.1-201ENST00000448473 371 ntBASIC2.54□□□□□ -2
RFC4P35249 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.54□□□□□ -2
RFC4P35249 MRPL42P6-201ENST00000486397 371 ntBASIC2.54□□□□□ -2
RFC4P35249 RNU6-311P-201ENST00000516224 102 ntBASIC2.54□□□□□ -2
RFC4P35249 RNU6-840P-201ENST00000517275 65 ntBASIC2.54□□□□□ -2
RFC4P35249 SCARNA11.3-201ENST00000517276 130 ntBASIC2.54□□□□□ -2
RFC4P35249 MTCO2P15-201ENST00000532655 656 ntBASIC2.54□□□□□ -2
RFC4P35249 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.54□□□□□ -2
RFC4P35249 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.54□□□□□ -2
RFC4P35249 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.54□□□□□ -2
RFC4P35249 VN1R82P-201ENST00000601481 356 ntBASIC2.54□□□□□ -2
RFC4P35249 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.54□□□□□ -2
RFC4P35249 AL357094.1-201ENST00000603845 844 ntBASIC2.54□□□□□ -2
RFC4P35249 AL592221.1-201ENST00000605266 382 ntBASIC2.54□□□□□ -2
RFC4P35249 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
RFC4P35249 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
RFC4P35249 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.53□□□□□ -2
RFC4P35249 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
RFC4P35249 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
RFC4P35249 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFC4P35249 SNORA23-201ENST00000365128 182 ntBASIC2.53□□□□□ -2
RFC4P35249 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
RFC4P35249 RNU6-516P-201ENST00000411381 104 ntBASIC2.53□□□□□ -2
RFC4P35249 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.53□□□□□ -2
RFC4P35249 AC083875.1-201ENST00000419509 405 ntBASIC2.53□□□□□ -2
RFC4P35249 ZNF863P-201ENST00000426746 417 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms