Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX1P22670 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX1P22670 RNA5SP392-201ENST00000516905 112 ntBASIC5.2□□□□□ -1.58
RFX1P22670 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX1P22670 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX1P22670 ZNF192P1-203ENST00000565888 810 ntBASIC5.2□□□□□ -1.58
RFX1P22670 MIR4782-201ENST00000577987 79 ntBASIC5.2□□□□□ -1.58
RFX1P22670 AC009318.2-201ENST00000610917 651 ntBASIC5.2□□□□□ -1.58
RFX1P22670 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX1P22670 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX1P22670 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX1P22670 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFX1P22670 AC032011.1-201ENST00000611703 1549 ntBASIC5.19□□□□□ -1.58
RFX1P22670 RNU6-227P-201ENST00000362865 103 ntBASIC5.19□□□□□ -1.58
RFX1P22670 SNORD50.1-201ENST00000362987 71 ntBASIC5.19□□□□□ -1.58
RFX1P22670 UBBP2-201ENST00000376781 231 ntBASIC5.19□□□□□ -1.58
RFX1P22670 MIR1193-201ENST00000408109 78 ntBASIC5.19□□□□□ -1.58
RFX1P22670 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.19□□□□□ -1.58
RFX1P22670 MTCO3P19-201ENST00000415864 321 ntBASIC5.19□□□□□ -1.58
RFX1P22670 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX1P22670 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX1P22670 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.19□□□□□ -1.58
RFX1P22670 RPS26P2-201ENST00000440331 348 ntBASIC5.19□□□□□ -1.58
RFX1P22670 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX1P22670 AC093840.1-201ENST00000511599 336 ntBASIC5.19□□□□□ -1.58
RFX1P22670 RNY3P15-201ENST00000516297 97 ntBASIC5.19□□□□□ -1.58
RFX1P22670 AC023575.1-201ENST00000580510 358 ntBASIC5.19□□□□□ -1.58
RFX1P22670 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX1P22670 U2.21-201ENST00000637295 81 ntBASIC5.19□□□□□ -1.58
RFX1P22670 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX1P22670 TLK1P1-201ENST00000456760 2440 ntBASIC5.19□□□□□ -1.58
RFX1P22670 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX1P22670 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX1P22670 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RFX1P22670 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX1P22670 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFX1P22670 FTLP6-201ENST00000355274 422 ntBASIC5.18□□□□□ -1.58
RFX1P22670 RNU6-379P-201ENST00000363813 104 ntBASIC5.18□□□□□ -1.58
RFX1P22670 Y_RNA.396-201ENST00000383949 103 ntBASIC5.18□□□□□ -1.58
RFX1P22670 MIR493-201ENST00000385254 89 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AC092423.1-201ENST00000430165 186 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AC006026.2-201ENST00000457376 180 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX1P22670 RPL23AP56-201ENST00000460778 453 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AC108751.2-201ENST00000469993 231 ntBASIC5.18□□□□□ -1.58
RFX1P22670 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.18□□□□□ -1.58
RFX1P22670 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.18□□□□□ -1.58
RFX1P22670 AP001880.2-201ENST00000538233 448 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.18□□□□□ -1.58
RFX1P22670 CYCSP39-201ENST00000565821 309 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.18□□□□□ -1.58
RFX1P22670 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX1P22670 MTND4LP5-201ENST00000605152 292 ntBASIC5.18□□□□□ -1.58
RFX1P22670 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.18□□□□□ -1.58
RFX1P22670 AL022401.1-201ENST00000619498 108 ntBASIC5.18□□□□□ -1.58
RFX1P22670 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.18□□□□□ -1.58
RFX1P22670 MIR6830-201ENST00000636015 70 ntBASIC5.18□□□□□ -1.58
RFX1P22670 U6.99-201ENST00000637524 83 ntBASIC5.18□□□□□ -1.58
RFX1P22670 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RFX1P22670 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFX1P22670 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFX1P22670 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX1P22670 AL445487.1-201ENST00000415694 1580 ntBASIC5.17□□□□□ -1.58
RFX1P22670 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.17□□□□□ -1.58
RFX1P22670 RNU6-428P-201ENST00000362942 107 ntBASIC5.17□□□□□ -1.58
RFX1P22670 Y_RNA.214-201ENST00000364201 112 ntBASIC5.17□□□□□ -1.58
RFX1P22670 RNA5SP479-201ENST00000364858 117 ntBASIC5.17□□□□□ -1.58
RFX1P22670 Y_RNA.307-201ENST00000365022 117 ntBASIC5.17□□□□□ -1.58
RFX1P22670 AC068538.1-201ENST00000376856 336 ntBASIC5.17□□□□□ -1.58
RFX1P22670 U3.37-201ENST00000408528 213 ntBASIC5.17□□□□□ -1.58
RFX1P22670 RN7SKP58-201ENST00000411010 305 ntBASIC5.17□□□□□ -1.58
RFX1P22670 USP9YP16-201ENST00000430287 407 ntBASIC5.17□□□□□ -1.58
RFX1P22670 AL512844.2-201ENST00000433990 593 ntBASIC5.17□□□□□ -1.58
RFX1P22670 AC079354.2-201ENST00000453523 154 ntBASIC5.17□□□□□ -1.58
RFX1P22670 USP9YP23-201ENST00000455085 407 ntBASIC5.17□□□□□ -1.58
RFX1P22670 AC133473.1-201ENST00000455173 299 ntBASIC5.17□□□□□ -1.58
RFX1P22670 RN7SKP210-201ENST00000459176 261 ntBASIC5.17□□□□□ -1.58
RFX1P22670 RPL21P104-201ENST00000464143 478 ntBASIC5.17□□□□□ -1.58
RFX1P22670 AC008958.1-201ENST00000511047 682 ntBASIC5.17□□□□□ -1.58
RFX1P22670 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.17□□□□□ -1.58
RFX1P22670 RNU6-408P-201ENST00000515910 100 ntBASIC5.17□□□□□ -1.58
RFX1P22670 RNU1-6P-201ENST00000516290 144 ntBASIC5.17□□□□□ -1.58
RFX1P22670 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RFX1P22670 LINC00933-203ENST00000559812 219 ntBASIC5.17□□□□□ -1.58
RFX1P22670 AC125232.2-201ENST00000592457 143 ntBASIC5.17□□□□□ -1.58
RFX1P22670 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RFX1P22670 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX1P22670 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFX1P22670 OR51H2P-202ENST00000641424 3046 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms