Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC85CA6NKD9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 OR56A5-201ENST00000340110 738 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 RNU6-266P-201ENST00000364225 107 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 SNORA75B-201ENST00000384053 137 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 COX5BP7-201ENST00000414780 274 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 EIF4HP2-201ENST00000424380 563 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 MTND1P14-201ENST00000427400 950 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC017083.1-201ENST00000428093 483 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 MTND1P17-201ENST00000448961 204 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AL121877.1-201ENST00000453704 622 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 RPL29P14-201ENST00000495837 428 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 MTND3P25-201ENST00000509243 135 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 RNA5SP454-201ENST00000517231 127 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC006349.1-201ENST00000555526 235 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 POLR3GP2-201ENST00000588366 668 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 MIR432-201ENST00000606207 94 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC004825.2-201ENST00000616634 455 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AC068254.2-201ENST00000623938 3577 ntBASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CCDC85CA6NKD9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 FRG1CP-201ENST00000358464 769 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 RNU1-33P-201ENST00000364249 162 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 Y_RNA.460-201ENST00000384255 102 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 RN7SKP158-201ENST00000410453 326 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 CYCSP33-201ENST00000414485 327 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 YPEL5P1-201ENST00000419731 367 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC025750.2-201ENST00000442609 450 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AL135752.1-201ENST00000479477 471 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC011005.2-201ENST00000487324 359 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 RNA5SP360-201ENST00000516555 118 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC009902.1-201ENST00000519351 183 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC087854.1-201ENST00000519706 414 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC015912.2-201ENST00000571053 181 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 MIR5187-201ENST00000583479 76 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC007938.3-201ENST00000604965 623 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AL050343.2-201ENST00000607338 280 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 SNORD39.4-201ENST00000620099 78 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AL031601.2-202ENST00000622650 282 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 AC048347.1-201ENST00000624621 427 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 ZNF519P1-201ENST00000449011 1626 ntBASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC85CA6NKD9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 MIR412-201ENST00000362142 91 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 RNU6-1252P-201ENST00000363054 104 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 RNU6-1303P-201ENST00000364841 107 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 SNORD116-11-201ENST00000383882 92 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 Y_RNA.387-201ENST00000383918 102 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 U1.1-201ENST00000384101 164 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 RNU6-217P-201ENST00000384164 104 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 SNORA48.8-201ENST00000391324 134 ntBASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC85CA6NKD9 RPL21P109-201ENST00000422213 475 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms