Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNU2-52P-201ENST00000410680 190 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 AC007738.1-201ENST00000413892 348 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 SNRPEP9-201ENST00000436794 238 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 SNORA25.12-201ENST00000516202 82 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 SNORA31.20-201ENST00000517111 133 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 MED28P6-201ENST00000558776 231 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 LINC00933-203ENST00000559812 219 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 MIR5571-201ENST00000577998 113 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 RN7SL753P-201ENST00000581238 290 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 MIR4505-201ENST00000582238 73 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 AC011445.2-201ENST00000599274 173 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 MIR6862-1-201ENST00000613016 70 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 MIR6862-2-201ENST00000614755 70 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 AC004825.2-201ENST00000616634 455 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 AC015914.2-201ENST00000618167 288 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 AL022311.1-201ENST00000623726 19416 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RCCD1A6NED2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
RCCD1A6NED2 STX3-208ENST00000641815 3236 ntBASIC5.5□□□□□ -1.53
RCCD1A6NED2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RCCD1A6NED2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RCCD1A6NED2 AC090971.4-201ENST00000560291 1800 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RCCD1A6NED2 MIR323A-201ENST00000362199 86 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 MIR105-1-201ENST00000385222 81 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 RN7SKP206-201ENST00000410823 293 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 AC074290.1-201ENST00000448883 135 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 RNU6-625P-201ENST00000459412 107 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.49□□□□□ -1.53
RCCD1A6NED2 AC097462.2-201ENST00000504623 481 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 RNU6-966P-201ENST00000516479 104 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 CYCSP39-201ENST00000565821 309 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 AC053481.4-201ENST00000583164 216 ntBASIC5.49□□□□□ -1.53
RCCD1A6NED2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.49□□□□□ -1.53
RCCD1A6NED2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.49□□□□□ -1.53
RCCD1A6NED2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RCCD1A6NED2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RCCD1A6NED2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.49□□□□□ -1.53
RCCD1A6NED2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RCCD1A6NED2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RCCD1A6NED2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RCCD1A6NED2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 SAMMSON-226ENST00000642089 1582 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RCCD1A6NED2 RNU4-11P-201ENST00000365287 132 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 UBBP2-201ENST00000376781 231 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 OR2AT2P-201ENST00000413438 905 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 SDHDP6-201ENST00000414693 480 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AC138623.1-201ENST00000418060 216 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 RAB28P5-201ENST00000427490 651 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 AC064862.4-201ENST00000442180 334 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 GPM6BP3-201ENST00000442797 145 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 RPL36AP39-201ENST00000445859 318 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AL451050.1-201ENST00000450126 415 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 RNU6-1211P-201ENST00000459179 105 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 RN7SL174P-201ENST00000475578 289 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AL121594.1-201ENST00000475906 575 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 Y_RNA.686-201ENST00000516548 134 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 RNA5SP54-201ENST00000516951 92 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AP002001.1-203ENST00000534002 267 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AC112693.2-201ENST00000556538 232 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 TRAV28-201ENST00000557548 323 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 MIR4458-201ENST00000578872 75 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 MIR4431-201ENST00000579990 94 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 MIR4472-2-201ENST00000582069 67 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 MIR3936-201ENST00000584304 110 ntBASIC5.48□□□□□ -1.53
RCCD1A6NED2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
RCCD1A6NED2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RCCD1A6NED2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RCCD1A6NED2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RCCD1A6NED2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.47□□□□□ -1.53
RCCD1A6NED2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RCCD1A6NED2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RCCD1A6NED2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.47□□□□□ -1.53
RCCD1A6NED2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms