Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.83□□□□□ -1.64
SALL4Q9UJQ4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AL592182.3-201ENST00000642132 3304 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 DEFB108F-201ENST00000344638 222 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 MIR514A1-201ENST00000385133 98 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 BX510359.2-201ENST00000417920 305 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 RPL21P38-201ENST00000418090 167 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AC068287.1-201ENST00000430283 295 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 RN7SL459P-201ENST00000481078 302 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 RPL30P10-201ENST00000488148 337 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 FAM60BP-201ENST00000578364 658 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 MIR378J-201ENST00000611988 109 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 OR4G2P-202ENST00000641004 1759 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AC008079.2-201ENST00000623543 20396 ntBASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL4Q9UJQ4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 AC021146.4-201ENST00000309229 279 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.27-201ENST00000362540 103 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RNA5SP505-201ENST00000364748 108 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 U3.13-201ENST00000364804 214 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RNU6-384P-201ENST00000364900 104 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 MTCYBP2-201ENST00000407745 171 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RNA5SP494-201ENST00000410653 129 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RNU6-1203P-201ENST00000410703 110 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RNU2-71P-201ENST00000411395 189 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 AC010326.1-201ENST00000462726 602 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RN7SKP276-201ENST00000516242 268 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 AC084851.1-201ENST00000529105 249 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 AL110118.1-201ENST00000553543 400 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 AC006557.5-201ENST00000603126 811 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 RNA5SP108-201ENST00000605921 117 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 MIR7703-201ENST00000620784 77 ntBASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SALL4Q9UJQ4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AP000560.1-201ENST00000624150 1937 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AL391987.6-201ENST00000305671 199 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.84-201ENST00000363011 104 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 Y_RNA.105-201ENST00000363182 111 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 RNA5SP22-201ENST00000365393 109 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 RNU6-338P-201ENST00000383888 105 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 RNU6-708P-201ENST00000384217 107 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 RNU6-121P-201ENST00000410525 99 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AL592148.1-201ENST00000413568 445 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 C4BPAP2-201ENST00000428434 478 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC005154.2-201ENST00000438110 379 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 NDUFB1P2-201ENST00000449477 176 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 PRELID3BP1-201ENST00000457142 540 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 RPL7P5-201ENST00000471472 736 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC098869.1-201ENST00000481627 292 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC074250.1-201ENST00000511117 192 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 RNU6-789P-201ENST00000517105 102 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 SNORA81.3-201ENST00000517283 198 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AC109479.2-201ENST00000517842 174 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 IGKV2-23-201ENST00000518729 323 ntBASIC4.8□□□□□ -1.64
SALL4Q9UJQ4 AL590705.4-201ENST00000532209 134 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms