Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU6-703P-201ENST00000516946 107 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC104576.1-201ENST00000524225 88 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 HMGB1P14-201ENST00000557424 591 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AMZ2P1-203ENST00000565833 850 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 MIR3160-1-201ENST00000577972 85 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 ATP5A1P2-202ENST00000616464 443 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC007742.2-201ENST00000618226 398 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC008785.1-201ENST00000624475 456 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 U6.99-201ENST00000637524 83 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM55Q9BYV6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM55Q9BYV6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC002546.1-201ENST00000588041 2504 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RN7SKP280-201ENST00000364196 304 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RNU6-1035P-201ENST00000384477 107 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RPS4XP3-201ENST00000398541 413 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RN7SKP53-201ENST00000411337 315 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RNU6-1304P-201ENST00000411374 106 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AL354751.2-201ENST00000415471 210 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RPL7AP25-201ENST00000423357 805 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RPL23AP24-201ENST00000458203 385 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RPL21P126-201ENST00000470049 478 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC084357.1-201ENST00000473404 255 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC006445.2-201ENST00000510061 472 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 RNU6-928P-201ENST00000516876 104 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC107016.1-201ENST00000550463 337 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 MIR6128-201ENST00000615528 109 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 MAPK10-253ENST00000641010 4072 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 AC018555.1-201ENST00000567548 1980 ntBASIC4.33□□□□□ -1.72
TRIM55Q9BYV6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 RNU6-593P-201ENST00000364716 112 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 Y_RNA.315-201ENST00000365117 102 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 MIR659-201ENST00000384963 97 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 RN7SKP27-201ENST00000410684 333 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 RNU6-954P-201ENST00000411355 107 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 ATG3P1-201ENST00000419507 911 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 RPS12P10-201ENST00000427031 377 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC025554.1-201ENST00000505641 188 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC116337.1-201ENST00000509680 687 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 RNU1-103P-201ENST00000516502 125 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 RNU6-1016P-201ENST00000516689 94 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC011602.1-201ENST00000546484 331 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 MIR3138-201ENST00000585238 82 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AL355598.1-201ENST00000604169 202 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC064836.2-201ENST00000609491 462 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC023043.4-201ENST00000612081 449 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AC084781.2-201ENST00000615568 161 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 AP005019.3-201ENST00000620418 560 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 Z69720.2-201ENST00000624755 279 ntBASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
TRIM55Q9BYV6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 AC125257.1-201ENST00000560400 2930 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 AC021146.4-201ENST00000309229 279 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 RNU6-37P-201ENST00000362692 107 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 RNU6-778P-201ENST00000363269 103 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 RNU6-270P-201ENST00000364131 105 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 RNU6-11P-201ENST00000364234 107 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 RNU6-7-201ENST00000364784 107 ntBASIC4.31□□□□□ -1.72
TRIM55Q9BYV6 RNU6-8-201ENST00000365467 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms