Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 Y_RNA.504-201ENST00000384481 104 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 SNORA37-201ENST00000384504 129 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 RNU6-837P-201ENST00000391056 108 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 MIR1271-201ENST00000408537 86 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AL645608.4-201ENST00000423619 154 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 RPEP3-201ENST00000425462 676 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AL591473.1-201ENST00000464297 313 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AC087477.1-201ENST00000465747 340 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AC010618.1-201ENST00000469924 477 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 RN7SKP234-201ENST00000517173 224 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AC002545.1-201ENST00000592511 181 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AC104465.1-201ENST00000611365 139 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AL365222.1-201ENST00000614661 98 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 AL161629.2-201ENST00000615347 275 ntBASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SH3RF1Q7Z6J0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.46□□□□□ -1.53
SH3RF1Q7Z6J0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.46□□□□□ -1.53
SH3RF1Q7Z6J0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.46□□□□□ -1.53
SH3RF1Q7Z6J0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SH3RF1Q7Z6J0 AL450326.2-201ENST00000421913 1962 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-227P-201ENST00000362865 103 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 Y_RNA.123-201ENST00000363338 102 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-384P-201ENST00000364900 104 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-514P-201ENST00000384208 107 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 MIR129-1-201ENST00000384972 72 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 TBCAP2-201ENST00000416175 326 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 AL358472.1-201ENST00000431295 329 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 SNORD116-28-201ENST00000516123 91 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RNA5SP471-201ENST00000516971 106 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 RN7SKP272-201ENST00000516988 232 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 MRPS18CP4-201ENST00000535821 231 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 AL139395.1-201ENST00000603662 160 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 SNORD113-5-201ENST00000607261 78 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 SALL4P2-201ENST00000423288 2910 ntBASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SH3RF1Q7Z6J0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AL138820.1-201ENST00000617901 5305 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 SNORA25.1-201ENST00000362326 128 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-1301P-201ENST00000362724 104 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 RNU6-153P-201ENST00000364422 104 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 SNORA36C-201ENST00000384289 132 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AL592291.1-201ENST00000403830 352 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 RNU2-61P-201ENST00000411069 191 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 U8.22-201ENST00000459141 133 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 RPS27P26-201ENST00000494583 239 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 RN7SL558P-201ENST00000497468 299 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AC023575.1-201ENST00000580510 358 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 BRDTP1-201ENST00000605735 677 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 AP001642.1-201ENST00000624727 2117 ntBASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.45□□□□□ -1.54
SH3RF1Q7Z6J0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 BX322639.1-202ENST00000423987 2213 ntBASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SH3RF1Q7Z6J0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms