Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC004383.1-201ENST00000438135 289 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AL590399.6-201ENST00000446396 307 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 PTMAP3-201ENST00000447474 330 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 LINC01399-202ENST00000458450 244 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 RNU7-169P-201ENST00000459456 61 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC133134.1-201ENST00000466800 359 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 MED28P2-201ENST00000475771 317 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 RN7SL812P-201ENST00000493791 279 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 SNORD116-26-201ENST00000516006 96 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 RNA5SP519-201ENST00000516480 119 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC126177.3-201ENST00000551839 688 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC012433.1-201ENST00000588916 398 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AC067852.4-201ENST00000590314 478 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 AL355877.2-201ENST00000603670 358 ntBASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL13A1Q5TAT6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 RNY3P11-201ENST00000364153 102 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 Y_RNA.471-201ENST00000384312 102 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 MIR30B-201ENST00000384850 88 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 SNORA69.1-201ENST00000390904 137 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 RNU6-882P-201ENST00000391025 103 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 HSPD1P21-201ENST00000436541 245 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 USP9YP7-201ENST00000436723 430 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 RPL29P29-201ENST00000448725 423 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 USP9YP32-201ENST00000452432 430 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 RNU6-927P-201ENST00000516199 100 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 RNU6-397P-201ENST00000516226 104 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 SNORA31.6-201ENST00000516241 130 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 RNU6-570P-201ENST00000517051 105 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 SNORA31.22-201ENST00000517204 135 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 AC091144.1-201ENST00000519573 138 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 AL359219.2-201ENST00000555184 348 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 MIR5701-3-201ENST00000578890 82 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 MIR5701-1-201ENST00000585138 82 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 AC009779.6-201ENST00000603972 165 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 AL121917.1-203ENST00000605534 577 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 MIR5701-2-201ENST00000615634 82 ntBASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.98□□□□□ -1.61
COL13A1Q5TAT6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AL133243.3-201ENST00000617415 3004 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AC093591.2-201ENST00000565254 3843 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR335-201ENST00000362173 94 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RNU1-35P-201ENST00000362782 153 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RNU1-76P-201ENST00000362903 159 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR301A-201ENST00000385261 86 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RAC1P3-201ENST00000416129 580 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RPL19P16-201ENST00000433839 588 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AC087588.1-201ENST00000462203 316 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 APOOP4-201ENST00000513530 597 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RNU6-513P-201ENST00000516104 104 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 SNORA81.3-201ENST00000517283 198 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 AC022080.3-201ENST00000544433 482 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR1244-1-201ENST00000612829 85 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR7111-201ENST00000619751 72 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR6839-201ENST00000620425 113 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR1244-3-201ENST00000635744 85 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR1244-2-201ENST00000636449 85 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 MIR1244-4-202ENST00000636813 85 ntBASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL13A1Q5TAT6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms