Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ALFQ53S48 SNORD116-2-201ENST00000384274 95 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 SNORD116-6-201ENST00000384711 96 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 FO393413.1-201ENST00000402892 195 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.35□□□□□ -1.87
ALFQ53S48 PIGFP2-201ENST00000421400 651 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.35□□□□□ -1.87
ALFQ53S48 AL160275.3-201ENST00000423876 471 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.35□□□□□ -1.87
ALFQ53S48 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.35□□□□□ -1.87
ALFQ53S48 MTATP6P16-201ENST00000434543 526 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.35□□□□□ -1.87
ALFQ53S48 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.35□□□□□ -1.87
ALFQ53S48 GZMAP1-201ENST00000503054 631 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.35□□□□□ -1.87
ALFQ53S48 RNU5F-8P-201ENST00000515941 111 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 SCARNA17.1-201ENST00000516211 143 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 SCARNA17.2-201ENST00000516334 143 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.35□□□□□ -1.87
ALFQ53S48 AP003072.2-201ENST00000527756 676 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC012213.3-201ENST00000577199 777 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 OR1M4P-201ENST00000589199 287 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.35□□□□□ -1.87
ALFQ53S48 AC068790.2-201ENST00000602601 557 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AL391813.1-201ENST00000603098 260 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 AC073657.2-201ENST00000605661 303 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 SCARNA17.4-201ENST00000614296 143 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
ALFQ53S48 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.35□□□□□ -1.87
ALFQ53S48 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.35□□□□□ -1.87
ALFQ53S48 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALFQ53S48 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ALFQ53S48 RNU6-1097P-201ENST00000363586 107 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 RNU6-61P-201ENST00000365528 109 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 RNU6-108P-201ENST00000365558 107 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALFQ53S48 SNORD116-9-201ENST00000384000 95 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 SNORD116-3-201ENST00000384287 95 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 SNORD116-7-201ENST00000384404 95 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 SNORD116-5-201ENST00000384462 95 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 SNORA40C-201ENST00000391285 128 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 UBE2V1P2-201ENST00000397758 440 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 RNA5SP111-201ENST00000411386 101 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.34□□□□□ -1.87
ALFQ53S48 AC133104.1-201ENST00000429100 218 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 SETP8-201ENST00000435341 628 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.34□□□□□ -1.87
ALFQ53S48 RPS15AP7-201ENST00000439294 405 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.34□□□□□ -1.87
ALFQ53S48 MTCYBP1-201ENST00000454315 1119 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 BTF3P15-201ENST00000455606 336 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC010424.1-201ENST00000506336 297 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 MTCO3P28-201ENST00000513351 515 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.34□□□□□ -1.87
ALFQ53S48 MTCYBP20-201ENST00000524239 1129 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 LINC00933-203ENST00000559812 219 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.34□□□□□ -1.87
ALFQ53S48 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 MIR2682-201ENST00000580305 110 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AL022154.1-201ENST00000604698 785 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC135507.1-201ENST00000607214 561 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 AC126118.1-201ENST00000607744 628 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 U6.114-201ENST00000636407 96 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALFQ53S48 ASNSP3-201ENST00000451989 1306 ntBASIC3.34□□□□□ -1.87
ALFQ53S48 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
ALFQ53S48 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
ALFQ53S48 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALFQ53S48 Y_RNA.333-201ENST00000365274 102 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 RNU6-1083P-201ENST00000384022 107 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 RNU6-19P-201ENST00000384718 107 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 U3.26-201ENST00000391236 204 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 OR51A5P-201ENST00000415429 942 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 SDCBPP3-201ENST00000419629 891 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.33□□□□□ -1.88
ALFQ53S48 AC092001.1-201ENST00000453012 261 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.33□□□□□ -1.88
ALFQ53S48 KLF3P2-201ENST00000465138 268 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.33□□□□□ -1.88
ALFQ53S48 CYCSP39-201ENST00000565821 309 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 MIR3913-1-201ENST00000577744 102 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 BNIP3P22-201ENST00000593399 556 ntBASIC3.33□□□□□ -1.88
ALFQ53S48 AC005261.5-201ENST00000596280 355 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms