Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NID1P14543 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NID1P14543 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.63□□□□□ -1.67
NID1P14543 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.63□□□□□ -1.67
NID1P14543 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NID1P14543 RNU6-428P-201ENST00000362942 107 ntBASIC4.63□□□□□ -1.67
NID1P14543 SNORD14B-201ENST00000364533 90 ntBASIC4.63□□□□□ -1.67
NID1P14543 RNU6-318P-201ENST00000384283 103 ntBASIC4.63□□□□□ -1.67
NID1P14543 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NID1P14543 RNU6-882P-201ENST00000391025 103 ntBASIC4.63□□□□□ -1.67
NID1P14543 LAP3P1-201ENST00000403648 294 ntBASIC4.63□□□□□ -1.67
NID1P14543 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.63□□□□□ -1.67
NID1P14543 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.63□□□□□ -1.67
NID1P14543 AL513331.1-201ENST00000411908 397 ntBASIC4.63□□□□□ -1.67
NID1P14543 OOSP1P1-201ENST00000423265 274 ntBASIC4.63□□□□□ -1.67
NID1P14543 AL450023.3-201ENST00000440592 271 ntBASIC4.63□□□□□ -1.67
NID1P14543 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.63□□□□□ -1.67
NID1P14543 UQCRBP2-201ENST00000447827 297 ntBASIC4.63□□□□□ -1.67
NID1P14543 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.63□□□□□ -1.67
NID1P14543 AC009220.1-201ENST00000451614 275 ntBASIC4.63□□□□□ -1.67
NID1P14543 AC007686.1-201ENST00000488511 463 ntBASIC4.63□□□□□ -1.67
NID1P14543 HMGB3P16-201ENST00000508037 287 ntBASIC4.63□□□□□ -1.67
NID1P14543 RNU6-426P-201ENST00000516464 97 ntBASIC4.63□□□□□ -1.67
NID1P14543 AC084851.1-201ENST00000529105 249 ntBASIC4.63□□□□□ -1.67
NID1P14543 AC099506.2-201ENST00000623074 221 ntBASIC4.63□□□□□ -1.67
NID1P14543 IGHVIII-44-202ENST00000636235 289 ntBASIC4.63□□□□□ -1.67
NID1P14543 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NID1P14543 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NID1P14543 SMG1P4-204ENST00000523028 4131 ntBASIC4.63□□□□□ -1.67
NID1P14543 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
NID1P14543 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NID1P14543 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.62□□□□□ -1.67
NID1P14543 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.62□□□□□ -1.67
NID1P14543 RAD17P1-201ENST00000418130 2042 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC233981.2-201ENST00000611524 1614 ntBASIC4.62□□□□□ -1.67
NID1P14543 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NID1P14543 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.62□□□□□ -1.67
NID1P14543 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.62□□□□□ -1.67
NID1P14543 SNORA36C-201ENST00000384289 132 ntBASIC4.62□□□□□ -1.67
NID1P14543 AL022722.2-201ENST00000402519 180 ntBASIC4.62□□□□□ -1.67
NID1P14543 SNORD12B-201ENST00000410433 91 ntBASIC4.62□□□□□ -1.67
NID1P14543 Y_RNA.597-201ENST00000410463 100 ntBASIC4.62□□□□□ -1.67
NID1P14543 AL390729.2-201ENST00000416137 156 ntBASIC4.62□□□□□ -1.67
NID1P14543 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC024067.1-201ENST00000426199 223 ntBASIC4.62□□□□□ -1.67
NID1P14543 AL691482.1-201ENST00000453255 87 ntBASIC4.62□□□□□ -1.67
NID1P14543 RPS17P2-201ENST00000461663 408 ntBASIC4.62□□□□□ -1.67
NID1P14543 PPIAP21-201ENST00000464473 501 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC114982.1-201ENST00000469402 321 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC006463.2-201ENST00000473326 348 ntBASIC4.62□□□□□ -1.67
NID1P14543 RPS27P26-201ENST00000494583 239 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.62□□□□□ -1.67
NID1P14543 RPL21P9-201ENST00000556149 474 ntBASIC4.62□□□□□ -1.67
NID1P14543 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.62□□□□□ -1.67
NID1P14543 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 AC008749.1-201ENST00000597650 306 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC234771.5-201ENST00000600161 514 ntBASIC4.62□□□□□ -1.67
NID1P14543 AL359881.1-201ENST00000602916 267 ntBASIC4.62□□□□□ -1.67
NID1P14543 AL591926.8-201ENST00000616876 211 ntBASIC4.62□□□□□ -1.67
NID1P14543 AC015914.2-201ENST00000618167 288 ntBASIC4.62□□□□□ -1.67
NID1P14543 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NID1P14543 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
NID1P14543 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NID1P14543 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NID1P14543 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
NID1P14543 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NID1P14543 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NID1P14543 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NID1P14543 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NID1P14543 LINC01109-201ENST00000603837 3081 ntBASIC4.61□□□□□ -1.67
NID1P14543 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.61□□□□□ -1.67
NID1P14543 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NID1P14543 SNURFL-201ENST00000309296 343 ntBASIC4.61□□□□□ -1.67
NID1P14543 SNORA73.1-201ENST00000363107 205 ntBASIC4.61□□□□□ -1.67
NID1P14543 RNU6-1249P-201ENST00000363237 111 ntBASIC4.61□□□□□ -1.67
NID1P14543 Y_RNA.136-201ENST00000363444 102 ntBASIC4.61□□□□□ -1.67
NID1P14543 Y_RNA.446-201ENST00000384178 104 ntBASIC4.61□□□□□ -1.67
NID1P14543 RNU6-17P-201ENST00000384245 107 ntBASIC4.61□□□□□ -1.67
NID1P14543 SNORA70.10-201ENST00000384515 134 ntBASIC4.61□□□□□ -1.67
NID1P14543 RNU6-18P-201ENST00000384527 107 ntBASIC4.61□□□□□ -1.67
NID1P14543 MIR186-201ENST00000384988 86 ntBASIC4.61□□□□□ -1.67
NID1P14543 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NID1P14543 BTF3L4P2-201ENST00000392798 346 ntBASIC4.61□□□□□ -1.67
NID1P14543 AL357139.1-201ENST00000407792 426 ntBASIC4.61□□□□□ -1.67
NID1P14543 RNU6-257P-201ENST00000410238 98 ntBASIC4.61□□□□□ -1.67
NID1P14543 CTSL3P-202ENST00000412179 788 ntBASIC4.61□□□□□ -1.67
NID1P14543 AC016397.1-201ENST00000412463 242 ntBASIC4.61□□□□□ -1.67
NID1P14543 AP000907.1-201ENST00000428428 510 ntBASIC4.61□□□□□ -1.67
NID1P14543 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.61□□□□□ -1.67
NID1P14543 AC117440.1-201ENST00000474107 571 ntBASIC4.61□□□□□ -1.67
NID1P14543 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NID1P14543 Y_RNA.719-201ENST00000517156 106 ntBASIC4.61□□□□□ -1.67
NID1P14543 BNIP3P5-201ENST00000562290 498 ntBASIC4.61□□□□□ -1.67
NID1P14543 AC105254.2-201ENST00000603636 436 ntBASIC4.61□□□□□ -1.67
NID1P14543 RPL23AP88-201ENST00000605759 454 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms