Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL031667.3-201ENST00000620124 655 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC092192.1-201ENST00000633154 1018 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CTDNEP1O95476 Y_RNA.302-201ENST00000364997 102 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 RNU6-114P-201ENST00000384704 105 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC009414.1-201ENST00000427200 443 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC003989.2-201ENST00000440224 169 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC104563.1-201ENST00000476147 376 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 RPL31P41-201ENST00000477967 372 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 MRPL42P6-201ENST00000486397 371 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC007182.2-201ENST00000489251 402 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 RPL38P4-201ENST00000502376 214 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 RNU6-798P-201ENST00000516912 103 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC025755.1-201ENST00000521306 278 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 MIR4513-201ENST00000581077 86 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC105224.1-201ENST00000587055 421 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AP000811.1-201ENST00000603803 651 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CTDNEP1O95476 RNU6-88P-201ENST00000606801 100 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AL158211.4-201ENST00000606988 584 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC103710.4-201ENST00000609301 899 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 UCA1.1-201ENST00000620952 75 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 AP000676.3-201ENST00000623299 569 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AP000770.2-201ENST00000623694 100 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 AC079597.1-201ENST00000624306 508 ntBASIC2.21□□□□□ -2.06
CTDNEP1O95476 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.21□□□□□ -2.06
CTDNEP1O95476 MTND4P1-201ENST00000457501 1466 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CTDNEP1O95476 RNU6-97P-201ENST00000363387 104 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 RNU5E-8P-201ENST00000363502 116 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 RNU6-853P-201ENST00000364306 107 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 RNU6-769P-201ENST00000384407 104 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 RNU6-1072P-201ENST00000384703 107 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 RNU6-443P-201ENST00000384780 107 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 MIR320C1-201ENST00000408566 88 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 MTCO1P17-201ENST00000411522 491 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 PPP1R11P2-201ENST00000423543 382 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AL445687.1-201ENST00000439946 251 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC087588.1-201ENST00000462203 316 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 RPS29P11-201ENST00000496507 171 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 SNORA3.4-201ENST00000515969 96 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 COX6CP5-201ENST00000527162 228 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 FAM92A1P1-201ENST00000528023 890 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC013828.2-201ENST00000532487 235 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC090888.1-201ENST00000561335 1141 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC012150.2-201ENST00000621300 544 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 AC131159.1-201ENST00000621854 213 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 DUXAP9-208ENST00000622815 614 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 CR848007.1-201ENST00000442354 1699 ntBASIC2.2□□□□□ -2.06
CTDNEP1O95476 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.2□□□□□ -2.06
CTDNEP1O95476 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CTDNEP1O95476 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.19□□□□□ -2.06
CTDNEP1O95476 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
CTDNEP1O95476 RNU6-461P-201ENST00000364195 107 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 MIR524-201ENST00000385242 87 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 GSTA9P-201ENST00000406231 611 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 AL513475.1-201ENST00000406602 315 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.19□□□□□ -2.06
CTDNEP1O95476 RNA5SP489-201ENST00000410986 109 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 VPS26BP1-201ENST00000417155 755 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.19□□□□□ -2.06
CTDNEP1O95476 RPL7P34-201ENST00000433316 712 ntBASIC2.19□□□□□ -2.06
CTDNEP1O95476 LARP1BP3-201ENST00000437229 869 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms