Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC004696.1-201ENST00000614345 607 ntBASIC3.75□□□□□ -1.81
PROM1O43490 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC007998.5-201ENST00000622938 237 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC134503.1-201ENST00000633048 54 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC244205.2-202ENST00000635781 342 ntBASIC3.75□□□□□ -1.81
PROM1O43490 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PROM1O43490 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.75□□□□□ -1.81
PROM1O43490 PRO1804-201ENST00000623780 2050 ntBASIC3.75□□□□□ -1.81
PROM1O43490 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PROM1O43490 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PROM1O43490 NCAPGP1-201ENST00000505112 1814 ntBASIC3.74□□□□□ -1.81
PROM1O43490 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.74□□□□□ -1.81
PROM1O43490 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.74□□□□□ -1.81
PROM1O43490 AC103710.2-202ENST00000641454 2853 ntBASIC3.74□□□□□ -1.81
PROM1O43490 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.74□□□□□ -1.81
PROM1O43490 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 SNORD46.1-201ENST00000364139 104 ntBASIC3.74□□□□□ -1.81
PROM1O43490 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.74□□□□□ -1.81
PROM1O43490 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PROM1O43490 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 SNORD116-29-201ENST00000384516 83 ntBASIC3.74□□□□□ -1.81
PROM1O43490 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 CISD1P1-201ENST00000393907 327 ntBASIC3.74□□□□□ -1.81
PROM1O43490 MTCYBP4-201ENST00000401524 249 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AL139039.1-201ENST00000401900 692 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RPL21P65-201ENST00000406094 466 ntBASIC3.74□□□□□ -1.81
PROM1O43490 MIR548K-201ENST00000408406 116 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RNU6ATAC-201ENST00000408749 126 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RNU4-6P-201ENST00000410804 122 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RNU6-370P-201ENST00000411008 104 ntBASIC3.74□□□□□ -1.81
PROM1O43490 VN1R36P-201ENST00000414936 291 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AL139396.1-201ENST00000421137 167 ntBASIC3.74□□□□□ -1.81
PROM1O43490 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.74□□□□□ -1.81
PROM1O43490 PPP1R11P2-201ENST00000423543 382 ntBASIC3.74□□□□□ -1.81
PROM1O43490 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
PROM1O43490 RPS3AP52-201ENST00000435639 297 ntBASIC3.74□□□□□ -1.81
PROM1O43490 SETP5-201ENST00000437270 562 ntBASIC3.74□□□□□ -1.81
PROM1O43490 GTF2IP13-201ENST00000438487 386 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RPL7P43-201ENST00000478876 753 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RPL21P93-201ENST00000480465 489 ntBASIC3.74□□□□□ -1.81
PROM1O43490 HMGB3P15-201ENST00000507326 574 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.74□□□□□ -1.81
PROM1O43490 Y_RNA.689-201ENST00000516589 107 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RNU6-256P-201ENST00000516747 97 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RNU6-566P-201ENST00000516790 107 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RNA5SP179-201ENST00000517284 121 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.74□□□□□ -1.81
PROM1O43490 AP005639.2-201ENST00000527592 928 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.74□□□□□ -1.81
PROM1O43490 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.74□□□□□ -1.81
PROM1O43490 AL121576.1-201ENST00000556055 276 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.74□□□□□ -1.81
PROM1O43490 DPPA3P3-201ENST00000603842 430 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AC091167.4-201ENST00000605079 184 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AL162730.1-201ENST00000605734 292 ntBASIC3.74□□□□□ -1.81
PROM1O43490 AC007619.2-201ENST00000605743 379 ntBASIC3.74□□□□□ -1.81
PROM1O43490 U2.17-201ENST00000611454 95 ntBASIC3.74□□□□□ -1.81
PROM1O43490 SDR42E1P2-201ENST00000614861 481 ntBASIC3.74□□□□□ -1.81
PROM1O43490 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.74□□□□□ -1.81
PROM1O43490 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.74□□□□□ -1.81
PROM1O43490 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PROM1O43490 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PROM1O43490 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 AL137003.2-201ENST00000606924 2538 ntBASIC3.73□□□□□ -1.81
PROM1O43490 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 RNU6-50P-201ENST00000362356 103 ntBASIC3.73□□□□□ -1.81
PROM1O43490 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PROM1O43490 SNORD70.1-201ENST00000391007 85 ntBASIC3.73□□□□□ -1.81
PROM1O43490 RNY4P36-201ENST00000391116 96 ntBASIC3.73□□□□□ -1.81
PROM1O43490 BX682237.1-201ENST00000415016 335 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AC092809.3-201ENST00000415453 231 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PROM1O43490 AC087650.1-201ENST00000431445 468 ntBASIC3.73□□□□□ -1.81
PROM1O43490 RPS29P7-201ENST00000439662 171 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 AC104058.1-201ENST00000448028 297 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 snoU13.4-201ENST00000458916 104 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 AC110792.1-201ENST00000491826 472 ntBASIC3.73□□□□□ -1.81
PROM1O43490 RPL7P47-201ENST00000497299 556 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 GMPSP1-201ENST00000514075 579 ntBASIC3.73□□□□□ -1.81
PROM1O43490 RNU6-1045P-201ENST00000516321 107 ntBASIC3.73□□□□□ -1.81
PROM1O43490 RNU6-677P-201ENST00000516914 101 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AP006587.4-201ENST00000526053 529 ntBASIC3.73□□□□□ -1.81
PROM1O43490 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.73□□□□□ -1.81
PROM1O43490 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.73□□□□□ -1.81
PROM1O43490 AC138761.3-201ENST00000579993 334 ntBASIC3.73□□□□□ -1.81
PROM1O43490 SNORD84-203ENST00000584275 78 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms