Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU6-434P-201ENST00000384376 107 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 SNORA16.2-201ENST00000390991 127 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 BX682237.1-201ENST00000415016 335 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 RPL7P10-201ENST00000417407 739 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 FTH1P6-201ENST00000430768 320 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 snoU13.4-201ENST00000458916 104 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AL049874.1-201ENST00000489560 388 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AP000889.2-201ENST00000532684 490 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 MED28P6-201ENST00000558776 231 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 RNU1-30P-201ENST00000606575 163 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC019176.2-201ENST00000611579 315 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AL355810.1-201ENST00000614629 552 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC034102.8-201ENST00000615146 484 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AP000553.6-201ENST00000641242 118 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 AC119674.1-207ENST00000641355 633 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 HSPA8P4-201ENST00000511877 1920 ntBASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPDC1A2A3K4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 SNORA7.2-201ENST00000364446 145 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 RNU6-715P-201ENST00000365204 103 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 MIR514A1-201ENST00000385133 98 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 RNA5SP219-201ENST00000390940 113 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL139039.1-201ENST00000401900 692 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL391417.1-201ENST00000404100 426 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 RNA5SP239-201ENST00000410218 129 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL160275.3-201ENST00000423876 471 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 RPS3AP46-201ENST00000448352 682 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL645939.1-201ENST00000453429 797 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 DYNLL1P5-201ENST00000467158 270 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC106707.2-201ENST00000484182 374 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC078817.1-201ENST00000492623 435 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 MTCO3P23-201ENST00000561363 289 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 MIR3921-201ENST00000577308 85 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 MIR3942-201ENST00000585264 109 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AP001330.4-201ENST00000604350 154 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC016727.1-205ENST00000605437 569 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 DUSP12P1-201ENST00000612874 516 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 AL160413.1-201ENST00000622780 310 ntBASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTPDC1A2A3K4 OR4G2P-202ENST00000641004 1759 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 FRG1CP-201ENST00000358464 769 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 Y_RNA.387-201ENST00000383918 102 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 Y_RNA.431-201ENST00000384086 102 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AL356057.2-201ENST00000403318 432 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 SNORA11.1-201ENST00000408133 129 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AL669831.1-202ENST00000428504 417 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 SAR1AP4-201ENST00000429225 591 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 GTF2IP13-201ENST00000438487 386 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC008264.1-201ENST00000447612 367 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 RNU7-167P-201ENST00000459160 62 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC087588.1-201ENST00000462203 316 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC104136.1-201ENST00000512969 394 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 RNU2-69P-201ENST00000516061 100 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms