Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC015917.1-201ENST00000579654 510 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 uc_338.34-201ENST00000617467 174 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 U2.21-201ENST00000637295 81 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 HSPA8P4-201ENST00000511877 1920 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 SRP72P2-201ENST00000344851 1979 ntBASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL4A3BPQ9Y5P4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
COL4A3BPQ9Y5P4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
COL4A3BPQ9Y5P4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL4A3BPQ9Y5P4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.15□□□□□ -1.74
COL4A3BPQ9Y5P4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
COL4A3BPQ9Y5P4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR412-201ENST00000362142 91 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 RNY3P3-201ENST00000363816 102 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU1-101P-201ENST00000391171 127 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AL353729.1-201ENST00000425044 720 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 GTF2IP20-201ENST00000431663 360 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 FGF7P6-202ENST00000451282 293 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU7-180P-201ENST00000459240 63 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 RPL21P13-201ENST00000488305 481 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 HMGB1P30-201ENST00000492455 606 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 HMGN1P11-201ENST00000508668 303 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC008716.1-201ENST00000511084 513 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-1178P-201ENST00000516674 107 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC025755.1-201ENST00000521306 278 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC074050.1-201ENST00000563247 211 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC244505.7-201ENST00000599675 272 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU1-30P-201ENST00000606575 163 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 AC010338.1-201ENST00000621823 717 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 U6.99-201ENST00000637524 83 ntBASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.15□□□□□ -1.75
COL4A3BPQ9Y5P4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-778P-201ENST00000363269 103 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-715P-201ENST00000365204 103 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-434P-201ENST00000384376 107 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RNA5SP171-201ENST00000391071 115 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AL592114.1-201ENST00000403842 483 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AL035423.1-201ENST00000420331 213 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AL158071.1-201ENST00000430315 461 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AL714022.1-201ENST00000439897 151 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RPL38P4-201ENST00000502376 214 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC091885.1-201ENST00000506658 268 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC079140.5-201ENST00000507882 310 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC114786.4-201ENST00000508771 728 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RNU6-703P-201ENST00000516946 107 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 SNORA31.19-201ENST00000517079 126 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 SNORA31.21-201ENST00000517180 77 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC026403.1-201ENST00000518938 295 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC009902.1-201ENST00000519351 183 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 H3F3AP1-201ENST00000559984 334 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 MIR4782-201ENST00000577987 79 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC012468.1-201ENST00000604888 430 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC007938.3-201ENST00000604965 623 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 SNORA51-201ENST00000606420 132 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC104458.1-201ENST00000608243 463 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AP003122.6-201ENST00000623831 495 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 AC006504.1-201ENST00000562493 3666 ntBASIC4.14□□□□□ -1.75
COL4A3BPQ9Y5P4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL4A3BPQ9Y5P4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms