Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AC068647.1-201ENST00000489539 2265 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-1048P-201ENST00000364054 107 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-793P-201ENST00000384233 104 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 SDHDP6-201ENST00000414693 480 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 YPEL5P1-201ENST00000419731 367 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AP000281.1-201ENST00000444036 316 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AC146507.2-201ENST00000460608 476 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 RPL23AP70-201ENST00000483361 460 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 RN7SKP234-201ENST00000517173 224 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU2-12P-201ENST00000517216 168 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AL136228.1-201ENST00000622221 319 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AC079776.5-201ENST00000641920 211 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 AL731532.1-201ENST00000623972 4236 ntBASIC5.8□□□□□ -1.48
PCDHGA4Q9Y5G9 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AC022164.1-201ENST00000568767 2673 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU1-150P-201ENST00000362491 162 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 U3.9-201ENST00000363823 204 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-1074P-201ENST00000383995 104 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-905P-201ENST00000384434 107 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 RNA5SP31-201ENST00000411144 127 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AL355433.1-201ENST00000422804 300 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AL049745.1-201ENST00000433953 286 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 FRG2FP-204ENST00000453982 852 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 SCARNA15.2-201ENST00000516409 127 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-762P-201ENST00000517107 102 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 SNORD84-203ENST00000584275 78 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AL136164.4-201ENST00000625013 2135 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AC004817.4-201ENST00000602396 3625 ntBASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA4Q9Y5G9 AL359693.1-201ENST00000614959 2407 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-1164P-201ENST00000364428 107 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 RNU6-1082P-201ENST00000364574 107 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 SNORA51.8-201ENST00000384234 132 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AL590399.6-201ENST00000446396 307 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 RN7SL57P-201ENST00000493687 290 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 UBE2CP3-201ENST00000502715 450 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC016632.1-201ENST00000503994 196 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC005868.1-201ENST00000536421 331 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC006199.1-201ENST00000548728 219 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 HSPE1P4-201ENST00000550617 308 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR6809-201ENST00000612189 116 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 uc_338.26-201ENST00000612659 160 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 MIR6719-201ENST00000622428 87 ntBASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA4Q9Y5G9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AL596211.1-201ENST00000569873 2277 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 STX3-208ENST00000641815 3236 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 Y_RNA.229-201ENST00000364347 113 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 RPS3AP2-201ENST00000407190 754 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 RNA5SP487-201ENST00000410186 122 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU2-68P-201ENST00000410878 191 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms