Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AL512844.2-201ENST00000433990 593 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AL357134.1-201ENST00000445848 426 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 RPL23AP15-201ENST00000450202 459 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 SNORD2.1-201ENST00000458762 69 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 HMGN2P13-201ENST00000476476 274 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 RNU6-659P-201ENST00000516454 104 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AC090615.1-201ENST00000577519 154 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AL596245.1-201ENST00000618994 362 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 ZNF299P-201ENST00000406845 1804 ntBASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PDZRN3Q9UPQ7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 SNORA22-201ENST00000383907 134 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RPL21P75-201ENST00000396599 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RPL21P28-201ENST00000401418 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 EBAG9P1-201ENST00000418955 543 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AL590556.1-201ENST00000423231 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RNU7-27P-201ENST00000459281 62 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RPL21P11-201ENST00000461458 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RPL21P39-201ENST00000463605 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RPL7AP28-201ENST00000464513 571 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AC109327.1-201ENST00000471666 403 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AC132942.1-201ENST00000486753 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AC093591.1-201ENST00000491435 481 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 RPL21P16-201ENST00000495531 483 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 IGKV2-36-201ENST00000519999 223 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AC023824.2-201ENST00000566185 400 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 MIR5699-201ENST00000578903 90 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 MIR4293-201ENST00000584305 78 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 SNHG22-203ENST00000617833 660 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 FP236240.3-201ENST00000623061 327 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 DLD-214ENST00000639772 421 ntTSL 5 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AL031595.2-201ENST00000624215 19071 ntBASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDZRN3Q9UPQ7 AL137003.2-201ENST00000606924 2538 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 RNY3P4-201ENST00000384428 101 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 RNU6-476P-201ENST00000384726 107 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 SNORD73A-201ENST00000386062 65 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AL591034.2-201ENST00000402839 359 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 OOSP1P1-201ENST00000423265 274 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 RPEP3-201ENST00000425462 676 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AL591043.1-201ENST00000432461 424 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 PIGFP3-201ENST00000441918 722 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 SNORD97-201ENST00000459187 142 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AC025755.1-201ENST00000521306 278 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AC007224.1-201ENST00000564410 144 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AC023575.1-201ENST00000580510 358 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 MIR3976-201ENST00000606807 139 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AC240442.1-201ENST00000616055 283 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 HSPA8P4-201ENST00000511877 1920 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 AL445437.1-201ENST00000623157 3087 ntBASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
PDZRN3Q9UPQ7 CASC19-204ENST00000641001 2055 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 EXOC5P1-201ENST00000510543 1969 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 RNU1-85P-201ENST00000364127 164 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 RN7SKP224-201ENST00000364140 325 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 RNA5SP509-201ENST00000364577 119 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 RNA5SP494-201ENST00000410653 129 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms