Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 COX6B1P1-201ENST00000415962 213 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 RANP8-201ENST00000444720 713 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AC073587.1-201ENST00000447093 876 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AL590664.1-201ENST00000448065 339 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 NDUFB1P2-201ENST00000449477 176 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AL160314.1-201ENST00000490836 438 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MTND1P19-201ENST00000511780 315 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-397P-201ENST00000516226 104 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR892C-201ENST00000516410 77 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 RNA5SP471-201ENST00000516971 106 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-897P-201ENST00000517135 105 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AC008033.2-201ENST00000542626 177 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AC105129.1-201ENST00000560250 297 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR3976-201ENST00000606807 139 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AP002826.1-201ENST00000608835 315 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 AC064801.1-201ENST00000612025 407 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR1244-1-201ENST00000612829 85 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR6810-201ENST00000622701 70 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 BMS1P21-201ENST00000634565 365 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR1244-3-201ENST00000635744 85 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR1244-2-201ENST00000636449 85 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MIR1244-4-202ENST00000636813 85 ntBASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM56Q9BRZ2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 MIR412-201ENST00000362142 91 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 U3.15-201ENST00000365398 212 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AC009237.10-201ENST00000414112 510 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 Z74021.1-201ENST00000423610 407 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AL590383.1-201ENST00000428602 75 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AC092423.1-201ENST00000430165 186 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 HMGN2P13-201ENST00000476476 274 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 TRBVB-201ENST00000477100 408 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AC022493.1-201ENST00000492984 337 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 IGKV2D-23-201ENST00000518179 286 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AP003733.2-201ENST00000529409 171 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 MED28P6-201ENST00000558776 231 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AL121917.1-203ENST00000605534 577 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AL136164.3-201ENST00000624429 3978 ntBASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM56Q9BRZ2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC000123.3-201ENST00000624029 4975 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.26-201ENST00000362539 101 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-212P-201ENST00000362642 104 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-512P-201ENST00000364438 103 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-200P-201ENST00000364743 107 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 RNU6-806P-201ENST00000365147 105 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.471-201ENST00000384312 102 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 Y_RNA.533-201ENST00000384596 114 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 SNORA69.1-201ENST00000390904 137 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 MIR548H3-201ENST00000408771 118 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 RN7SKP167-201ENST00000411047 285 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 EIF4EP2-201ENST00000422816 654 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 AC092017.2-201ENST00000427600 362 ntBASIC4.73□□□□□ -1.65
TRIM56Q9BRZ2 FABP5P15-201ENST00000453566 214 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms