Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL160275.3-201ENST00000423876 471 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 UBE2V1P4-201ENST00000425374 344 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC008065.1-201ENST00000428525 348 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AL117339.2-201ENST00000430475 180 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC112492.4-201ENST00000456549 352 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 HMGB1P25-201ENST00000468402 607 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC022447.4-201ENST00000504053 364 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC099522.1-202ENST00000514718 367 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 RNU2-53P-201ENST00000516257 147 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-352P-201ENST00000516908 107 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC007375.1-201ENST00000554513 578 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 Z98751.3-201ENST00000604447 521 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC010201.1-201ENST00000605051 540 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 RNU6-85P-201ENST00000605989 107 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC103858.2-201ENST00000621471 543 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 AC091905.2-201ENST00000623143 306 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 MIR4496-201ENST00000635896 61 ntBASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SYNGAP1Q96PV0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 MTND5P7-201ENST00000413558 1798 ntBASIC4.9□□□□□ -1.62
SYNGAP1Q96PV0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RNY3P11-201ENST00000364153 102 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.477-201ENST00000384352 108 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 AC110754.1-201ENST00000399740 601 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 HDGFP1-201ENST00000405943 252 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 MIR1252-201ENST00000408861 65 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP146-201ENST00000410743 123 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RN7SKP284-201ENST00000411002 343 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RPL21P90-201ENST00000415692 466 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 BX276092.3-201ENST00000424182 230 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 AL158071.1-201ENST00000430315 461 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 ARL5AP4-201ENST00000430731 512 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-1132P-201ENST00000459214 107 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RNU7-138P-201ENST00000459479 64 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-408P-201ENST00000515910 100 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP519-201ENST00000516480 119 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.715-201ENST00000517082 110 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 HMGB3P26-201ENST00000560051 582 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 MIR4273-201ENST00000582824 84 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 AC174048.1-201ENST00000603389 144 ntBASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.9□□□□□ -1.63
SYNGAP1Q96PV0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 Y_RNA.222-201ENST00000364264 102 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP175-201ENST00000364275 119 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP22-201ENST00000365393 109 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RPS20P14-201ENST00000412545 360 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 BX842559.1-201ENST00000419615 532 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 COX6B1P7-201ENST00000430845 235 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AL645568.3-201ENST00000433683 316 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC011816.1-201ENST00000441346 546 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 MTCO3P8-201ENST00000453691 755 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RNU6-953P-201ENST00000459154 107 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RNU7-169P-201ENST00000459456 61 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RPL37P6-201ENST00000460682 294 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC069499.1-201ENST00000489433 509 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RPL7P23-201ENST00000493874 747 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 RNA5SP73-201ENST00000516744 108 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC069113.1-201ENST00000517763 267 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC040926.1-201ENST00000530195 238 ntBASIC4.89□□□□□ -1.63
SYNGAP1Q96PV0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms