Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 SNORD63-201ENST00000384262 68 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 RNU6-339P-201ENST00000384310 107 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 RNU6-257P-201ENST00000410238 98 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 EIF4HP2-201ENST00000424380 563 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 TDGF1P1-201ENST00000445734 527 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 RPL37P6-202ENST00000464216 403 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 RNU6-919P-201ENST00000516731 104 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 HMGB1P14-201ENST00000557424 591 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 NF1P5-201ENST00000588287 448 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 RPL7P50-201ENST00000600588 727 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FOXR1Q6PIV2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 RNA5SP455-201ENST00000365190 119 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.400-201ENST00000383963 111 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.569-201ENST00000384749 103 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 SNORD78.2-201ENST00000391076 69 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 ENSAP1-201ENST00000392855 326 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 CYB5AP4-201ENST00000396692 399 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC009237.10-201ENST00000414112 510 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC009220.1-201ENST00000451614 275 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 RN7SL738P-201ENST00000470264 297 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 RPL30P1-201ENST00000488676 339 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 MRPS33P2-201ENST00000507850 322 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 HIGD1AP3-201ENST00000515857 278 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 EDDM3DP-201ENST00000554692 434 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC103996.1-201ENST00000555468 102 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 FAM60BP-201ENST00000578364 658 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 MIR4330-201ENST00000579077 105 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC091905.4-201ENST00000623432 202 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 MTND1P7-201ENST00000632801 297 ntBASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FOXR1Q6PIV2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 AC092747.4-201ENST00000620519 1861 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 RNU6-1301P-201ENST00000362724 104 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.215-201ENST00000364204 112 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.273-201ENST00000364703 102 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 Y_RNA.435-201ENST00000384095 112 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 AL160275.2-201ENST00000412010 394 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 SSXP9-201ENST00000417503 292 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 AC009238.2-201ENST00000431026 355 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 AC005002.2-201ENST00000438228 269 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 RPL26P6-201ENST00000440913 438 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 RN7SKP210-201ENST00000459176 261 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 RN7SL189P-201ENST00000468631 289 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 RPS26P21-201ENST00000475397 348 ntBASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXR1Q6PIV2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms