Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDH1Q08174 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH1Q08174 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH1Q08174 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH1Q08174 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH1Q08174 AL391987.6-201ENST00000305671 199 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 U3.6-201ENST00000363622 211 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 Y_RNA.245-201ENST00000364493 95 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 U3.13-201ENST00000364804 214 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 RNU6-629P-201ENST00000384061 103 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 Y_RNA.462-201ENST00000384268 102 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 MIR10A-201ENST00000385043 110 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 U3.30-201ENST00000391308 210 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AL590762.2-201ENST00000395798 571 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDH1Q08174 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 EIF4A1P3-201ENST00000411521 244 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 Z85995.1-201ENST00000415547 335 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH1Q08174 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH1Q08174 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDH1Q08174 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH1Q08174 AL139109.1-201ENST00000455491 297 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDH1Q08174 RN7SKP210-201ENST00000459176 261 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AL160314.1-201ENST00000490836 438 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 SNORA31.6-201ENST00000516241 130 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 RNU6-406P-201ENST00000516470 107 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 RNU5B-3P-201ENST00000516601 115 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDH1Q08174 HIGD1AP5-201ENST00000529959 259 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDH1Q08174 AC093249.4-201ENST00000564755 259 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 MIR4700-201ENST00000578311 74 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 SRGNP1-201ENST00000603392 451 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 RNA5SP108-201ENST00000605921 117 ntBASIC4.62□□□□□ -1.67
PCDH1Q08174 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDH1Q08174 AC087190.4-201ENST00000574616 8334 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 MAPK10-263ENST00000641052 4307 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 MIR215-201ENST00000384858 110 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 MIR190B-201ENST00000401119 79 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 RNU2-14P-201ENST00000411053 191 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 MTCO3P29-201ENST00000432119 779 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 snoU13.20-201ENST00000459180 104 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 RN7SL826P-201ENST00000479724 288 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AC104164.2-201ENST00000496953 495 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.61□□□□□ -1.67
PCDH1Q08174 RNU1-6P-201ENST00000516290 144 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 SNORA31.20-201ENST00000517111 133 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AF186190.1-201ENST00000517470 480 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AC025755.1-201ENST00000521306 278 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AP004371.1-201ENST00000525240 214 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 ATP5F1P5-201ENST00000526403 760 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 AC007458.1-201ENST00000542812 373 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AL442163.3-201ENST00000554110 156 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH1Q08174 AC130289.1-201ENST00000577321 73 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDH1Q08174 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH1Q08174 AL645944.1-201ENST00000603857 493 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 AC131238.1-201ENST00000617135 328 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 LINC00901.1-201ENST00000617252 152 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH1Q08174 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 AC004925.1-201ENST00000624256 2706 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDH1Q08174 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 SCN1A-220ENST00000641603 12506 ntBASIC4.61□□□□□ -1.67
PCDH1Q08174 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDH1Q08174 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PCDH1Q08174 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
PCDH1Q08174 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.6□□□□□ -1.67
PCDH1Q08174 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH1Q08174 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDH1Q08174 MAPK10-286ENST00000641208 8747 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDH1Q08174 RNA5SP123-201ENST00000363244 119 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 Y_RNA.352-201ENST00000365439 102 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDH1Q08174 RNA5SP36-201ENST00000410197 133 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 RN7SKP106-201ENST00000410832 272 ntBASIC4.6□□□□□ -1.67
PCDH1Q08174 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms