Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.42□□□□□ -2.02
CBX1P83916 AL355472.4-201ENST00000610233 626 ntBASIC2.42□□□□□ -2.02
CBX1P83916 AL139418.1-201ENST00000613613 177 ntBASIC2.42□□□□□ -2.02
CBX1P83916 ATP5A1P2-202ENST00000616464 443 ntBASIC2.42□□□□□ -2.02
CBX1P83916 AP002791.1-201ENST00000623291 381 ntBASIC2.42□□□□□ -2.02
CBX1P83916 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CBX1P83916 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.42□□□□□ -2.02
CBX1P83916 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.41□□□□□ -2.02
CBX1P83916 EEF1A1P41-201ENST00000414667 207 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AL353729.1-201ENST00000425044 720 ntBASIC2.41□□□□□ -2.02
CBX1P83916 MTCO3P30-201ENST00000426425 670 ntBASIC2.41□□□□□ -2.02
CBX1P83916 ISCA1P1-201ENST00000426679 387 ntBASIC2.41□□□□□ -2.02
CBX1P83916 CR769776.1-201ENST00000441254 787 ntBASIC2.41□□□□□ -2.02
CBX1P83916 COX6CP12-201ENST00000446748 202 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AL021397.1-201ENST00000451806 248 ntBASIC2.41□□□□□ -2.02
CBX1P83916 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.41□□□□□ -2.02
CBX1P83916 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.41□□□□□ -2.02
CBX1P83916 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.41□□□□□ -2.02
CBX1P83916 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.41□□□□□ -2.02
CBX1P83916 SNORA31.3-201ENST00000516029 96 ntBASIC2.41□□□□□ -2.02
CBX1P83916 SCARNA1-201ENST00000517138 166 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.41□□□□□ -2.02
CBX1P83916 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.41□□□□□ -2.02
CBX1P83916 MTATP6P15-201ENST00000527233 835 ntBASIC2.41□□□□□ -2.02
CBX1P83916 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.41□□□□□ -2.02
CBX1P83916 AC243972.3-201ENST00000539655 198 ntBASIC2.41□□□□□ -2.02
CBX1P83916 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.41□□□□□ -2.02
CBX1P83916 AC023824.2-201ENST00000566185 400 ntBASIC2.41□□□□□ -2.02
CBX1P83916 MIR3908-201ENST00000579798 126 ntBASIC2.41□□□□□ -2.02
CBX1P83916 MIR4658-201ENST00000584344 65 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AL391813.1-201ENST00000603098 260 ntBASIC2.41□□□□□ -2.02
CBX1P83916 ATP1B3P1-201ENST00000605365 821 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AC067747.1-201ENST00000608026 250 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AC025594.3-201ENST00000613068 790 ntBASIC2.41□□□□□ -2.02
CBX1P83916 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.41□□□□□ -2.02
CBX1P83916 HMGB1P24-202ENST00000615653 685 ntBASIC2.41□□□□□ -2.02
CBX1P83916 ADAM3A-203ENST00000461344 2157 ntBASIC2.41□□□□□ -2.02
CBX1P83916 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CBX1P83916 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.4□□□□□ -2.02
CBX1P83916 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CBX1P83916 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CBX1P83916 CENPCP1-201ENST00000533085 2578 ntBASIC2.4□□□□□ -2.02
CBX1P83916 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CBX1P83916 RNA5SP160-201ENST00000364866 120 ntBASIC2.4□□□□□ -2.03
CBX1P83916 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CBX1P83916 SSR1P2-201ENST00000415208 787 ntBASIC2.4□□□□□ -2.03
CBX1P83916 ZNF90P2-204ENST00000419323 1075 ntBASIC2.4□□□□□ -2.03
CBX1P83916 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.4□□□□□ -2.03
CBX1P83916 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.4□□□□□ -2.03
CBX1P83916 RPS24P13-201ENST00000442520 397 ntBASIC2.4□□□□□ -2.03
CBX1P83916 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.4□□□□□ -2.03
CBX1P83916 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.4□□□□□ -2.03
CBX1P83916 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.4□□□□□ -2.03
CBX1P83916 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.4□□□□□ -2.03
CBX1P83916 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.4□□□□□ -2.03
CBX1P83916 AL121769.1-201ENST00000469473 401 ntBASIC2.4□□□□□ -2.03
CBX1P83916 RPS29P26-201ENST00000477483 171 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AC026801.1-201ENST00000497178 464 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
CBX1P83916 SNORA31.6-201ENST00000516241 130 ntBASIC2.4□□□□□ -2.03
CBX1P83916 RNU5A-4P-201ENST00000516588 111 ntBASIC2.4□□□□□ -2.03
CBX1P83916 RNU1-40P-201ENST00000516816 164 ntBASIC2.4□□□□□ -2.03
CBX1P83916 RNU1-97P-201ENST00000516872 164 ntBASIC2.4□□□□□ -2.03
CBX1P83916 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.4□□□□□ -2.03
CBX1P83916 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.4□□□□□ -2.03
CBX1P83916 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.4□□□□□ -2.03
CBX1P83916 AC021739.1-201ENST00000559631 174 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AC074050.1-201ENST00000563247 211 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AL049838.1-201ENST00000563647 981 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.4□□□□□ -2.03
CBX1P83916 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
CBX1P83916 RPS15AP11-201ENST00000594193 385 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AC090970.3-201ENST00000612566 866 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AL607023.1-201ENST00000620045 248 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AP001002.2-201ENST00000625137 386 ntBASIC2.4□□□□□ -2.03
CBX1P83916 AL137790.1-201ENST00000634283 177 ntBASIC2.4□□□□□ -2.03
CBX1P83916 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CBX1P83916 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.4□□□□□ -2.03
CBX1P83916 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
CBX1P83916 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CBX1P83916 ZNF876P-202ENST00000398732 1485 ntBASIC2.39□□□□□ -2.03
CBX1P83916 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.39□□□□□ -2.03
CBX1P83916 MTND4P16-201ENST00000466108 1367 ntBASIC2.39□□□□□ -2.03
CBX1P83916 RNY4P24-201ENST00000362735 96 ntBASIC2.39□□□□□ -2.03
CBX1P83916 RNU6-7-201ENST00000364784 107 ntBASIC2.39□□□□□ -2.03
CBX1P83916 RNU6-8-201ENST00000365467 107 ntBASIC2.39□□□□□ -2.03
CBX1P83916 SNORA18.3-201ENST00000384122 132 ntBASIC2.39□□□□□ -2.03
CBX1P83916 RNU6-658P-201ENST00000384606 106 ntBASIC2.39□□□□□ -2.03
CBX1P83916 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CBX1P83916 RNU6-220P-201ENST00000390919 107 ntBASIC2.39□□□□□ -2.03
CBX1P83916 RNA5SP21-201ENST00000410917 96 ntBASIC2.39□□□□□ -2.03
CBX1P83916 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.39□□□□□ -2.03
CBX1P83916 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.39□□□□□ -2.03
CBX1P83916 TIMM9P1-201ENST00000436122 256 ntBASIC2.39□□□□□ -2.03
CBX1P83916 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CBX1P83916 HMGN2P10-201ENST00000448085 265 ntBASIC2.39□□□□□ -2.03
CBX1P83916 MTATP6P7-201ENST00000453315 681 ntBASIC2.39□□□□□ -2.03
CBX1P83916 ANKRD26P4-201ENST00000455755 950 ntBASIC2.39□□□□□ -2.03
CBX1P83916 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.39□□□□□ -2.03
CBX1P83916 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms