Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRIM1P49642 RNU6-1301P-201ENST00000362724 104 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 RNA5SP509-201ENST00000364577 119 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 RNU6-146P-201ENST00000384602 108 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PRIM1P49642 RNU6-918P-201ENST00000391219 106 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 RNU6-712P-201ENST00000410558 100 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 RNU6-735P-201ENST00000410612 107 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 Y_RNA.629-201ENST00000411368 105 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.25□□□□□ -1.41
PRIM1P49642 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.25□□□□□ -1.41
PRIM1P49642 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.25□□□□□ -1.41
PRIM1P49642 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.25□□□□□ -1.41
PRIM1P49642 NUTF2P3-201ENST00000448540 384 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.25□□□□□ -1.41
PRIM1P49642 AP001781.1-201ENST00000530977 207 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 AK6P2-201ENST00000549020 471 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.25□□□□□ -1.41
PRIM1P49642 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.25□□□□□ -1.41
PRIM1P49642 AC120057.2-201ENST00000571520 271 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 SNORD84-203ENST00000584275 78 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 MIR3138-201ENST00000585238 82 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.25□□□□□ -1.41
PRIM1P49642 AC008121.1-201ENST00000603244 268 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 AL121932.1-201ENST00000605542 214 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 AL365265.1-201ENST00000621045 234 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 Clostridiales-1.2-201ENST00000636724 160 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.25□□□□□ -1.41
PRIM1P49642 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC6.25□□□□□ -1.41
PRIM1P49642 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
PRIM1P49642 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRIM1P49642 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PRIM1P49642 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.24□□□□□ -1.41
PRIM1P49642 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 U3.6-201ENST00000363622 211 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 Y_RNA.398-201ENST00000383952 99 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 Y_RNA.441-201ENST00000384123 112 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 SNORA46.1-201ENST00000391069 153 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 SNORA48.4-201ENST00000391089 134 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 SNORA48.7-201ENST00000391302 135 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 U3.32-201ENST00000408116 212 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 RNU6-1025P-201ENST00000410629 104 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 AL158156.1-201ENST00000422509 473 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC6.24□□□□□ -1.41
PRIM1P49642 AC034236.1-201ENST00000469891 373 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 RPS26P21-201ENST00000475397 348 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.24□□□□□ -1.41
PRIM1P49642 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.24□□□□□ -1.41
PRIM1P49642 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.24□□□□□ -1.41
PRIM1P49642 RAD17P1-201ENST00000418130 2042 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 AL450345.1-202ENST00000605741 3881 ntBASIC6.24□□□□□ -1.41
PRIM1P49642 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.24□□□□□ -1.41
PRIM1P49642 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.24□□□□□ -1.41
PRIM1P49642 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PRIM1P49642 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 GVINP1-202ENST00000531871 7271 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.23□□□□□ -1.41
PRIM1P49642 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PRIM1P49642 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC6.23□□□□□ -1.41
PRIM1P49642 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 UBE2WP1-201ENST00000362030 340 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 RNU6-1249P-201ENST00000363237 111 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 RNU6-21P-201ENST00000384710 107 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 AL022722.2-201ENST00000402519 180 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 TMSB10P2-201ENST00000416049 131 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.23□□□□□ -1.41
PRIM1P49642 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.23□□□□□ -1.41
PRIM1P49642 AC124916.1-201ENST00000444020 547 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 AL162591.2-201ENST00000449634 317 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 snoU13.3-201ENST00000459441 104 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 RPL23AP65-201ENST00000475608 468 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.23□□□□□ -1.41
PRIM1P49642 AC103996.1-201ENST00000555468 102 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.23□□□□□ -1.41
PRIM1P49642 AL161629.2-201ENST00000615347 275 ntBASIC6.23□□□□□ -1.41
PRIM1P49642 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.23□□□□□ -1.41
PRIM1P49642 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
PRIM1P49642 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PRIM1P49642 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PRIM1P49642 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC6.22□□□□□ -1.41
PRIM1P49642 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PRIM1P49642 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PRIM1P49642 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PRIM1P49642 MIR34A-201ENST00000385130 110 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PRIM1P49642 Y_RNA.580-201ENST00000391004 95 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 RN7SKP51-201ENST00000410781 304 ntBASIC6.22□□□□□ -1.41
PRIM1P49642 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms