Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 CECR9-201ENST00000453421 199 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX4O60224 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX4O60224 snoU13.28-201ENST00000459235 104 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.99□□□□□ -1.93
SSX4O60224 RN7SL807P-201ENST00000470923 297 ntBASIC2.99□□□□□ -1.93
SSX4O60224 RPL39P36-201ENST00000490784 156 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC082651.2-201ENST00000496833 166 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.99□□□□□ -1.93
SSX4O60224 Y_RNA.689-201ENST00000516589 107 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC107934.2-201ENST00000518653 310 ntBASIC2.99□□□□□ -1.93
SSX4O60224 FAM92A1P1-201ENST00000528023 890 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.99□□□□□ -1.93
SSX4O60224 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX4O60224 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.99□□□□□ -1.93
SSX4O60224 AC010546.1-201ENST00000569391 485 ntBASIC2.99□□□□□ -1.93
SSX4O60224 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
SSX4O60224 FTX_3.1-201ENST00000610451 147 ntBASIC2.99□□□□□ -1.93
SSX4O60224 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 AP003355.3-201ENST00000623465 114 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC093648.1-201ENST00000623546 606 ntBASIC2.99□□□□□ -1.93
SSX4O60224 AC009161.2-201ENST00000624626 138 ntBASIC2.99□□□□□ -1.93
SSX4O60224 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SSX4O60224 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SSX4O60224 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX4O60224 AL049781.1-201ENST00000623195 3585 ntBASIC2.98□□□□□ -1.93
SSX4O60224 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.98□□□□□ -1.93
SSX4O60224 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.98□□□□□ -1.93
SSX4O60224 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SSX4O60224 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.98□□□□□ -1.93
SSX4O60224 Y_RNA.41-201ENST00000362646 102 ntBASIC2.98□□□□□ -1.93
SSX4O60224 RNU6-1103P-201ENST00000384150 107 ntBASIC2.98□□□□□ -1.93
SSX4O60224 RNU6-190P-201ENST00000384154 102 ntBASIC2.98□□□□□ -1.93
SSX4O60224 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AC099548.1-201ENST00000421443 426 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.98□□□□□ -1.93
SSX4O60224 ISCA1P1-201ENST00000426679 387 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AC005326.1-201ENST00000429197 123 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AC073464.1-201ENST00000429823 534 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AL592045.1-201ENST00000429867 352 ntBASIC2.98□□□□□ -1.93
SSX4O60224 GPM6BP2-201ENST00000432046 144 ntBASIC2.98□□□□□ -1.93
SSX4O60224 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 AL591212.2-201ENST00000433923 257 ntBASIC2.98□□□□□ -1.93
SSX4O60224 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 GPM6BP1-201ENST00000446387 144 ntBASIC2.98□□□□□ -1.93
SSX4O60224 RBMY2UP-201ENST00000453474 324 ntBASIC2.98□□□□□ -1.93
SSX4O60224 FABP5P15-201ENST00000453566 214 ntBASIC2.98□□□□□ -1.93
SSX4O60224 RPL12P25-201ENST00000455592 494 ntBASIC2.98□□□□□ -1.93
SSX4O60224 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.98□□□□□ -1.93
SSX4O60224 HMGB1P29-201ENST00000505659 499 ntBASIC2.98□□□□□ -1.93
SSX4O60224 MTCYBP20-201ENST00000524239 1129 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AP000889.1-201ENST00000530968 660 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.98□□□□□ -1.93
SSX4O60224 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 AC245505.1-201ENST00000556398 224 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AC004805.2-201ENST00000605382 482 ntBASIC2.98□□□□□ -1.93
SSX4O60224 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSX4O60224 AC022893.3-201ENST00000607665 437 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AC073308.1-201ENST00000623696 305 ntBASIC2.98□□□□□ -1.93
SSX4O60224 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.98□□□□□ -1.93
SSX4O60224 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 OR5AK4P-201ENST00000635912 903 ntBASIC2.98□□□□□ -1.93
SSX4O60224 AL365361.1-201ENST00000566942 3481 ntBASIC2.98□□□□□ -1.93
SSX4O60224 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSX4O60224 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSX4O60224 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SSX4O60224 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SSX4O60224 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.98□□□□□ -1.93
SSX4O60224 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SSX4O60224 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.98□□□□□ -1.93
SSX4O60224 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SSX4O60224 RNU6-179P-201ENST00000363350 107 ntBASIC2.97□□□□□ -1.93
SSX4O60224 Y_RNA.159-201ENST00000363674 87 ntBASIC2.97□□□□□ -1.93
SSX4O60224 RNU6-61P-201ENST00000365528 109 ntBASIC2.97□□□□□ -1.93
SSX4O60224 MIR634-201ENST00000385208 97 ntBASIC2.97□□□□□ -1.93
SSX4O60224 SNORA48.2-201ENST00000390926 124 ntBASIC2.97□□□□□ -1.93
SSX4O60224 SNORD17-201ENST00000390930 237 ntBASIC2.97□□□□□ -1.93
SSX4O60224 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX4O60224 AL109913.1-201ENST00000421173 514 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC005300.1-201ENST00000428401 373 ntBASIC2.97□□□□□ -1.93
SSX4O60224 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.97□□□□□ -1.93
SSX4O60224 AL353705.1-201ENST00000433468 480 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC002486.1-201ENST00000435098 391 ntBASIC2.97□□□□□ -1.93
SSX4O60224 SNRPEP9-201ENST00000436794 238 ntBASIC2.97□□□□□ -1.93
SSX4O60224 DNAJC19P4-201ENST00000440115 345 ntBASIC2.97□□□□□ -1.93
SSX4O60224 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.97□□□□□ -1.93
SSX4O60224 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.97□□□□□ -1.93
SSX4O60224 AL031183.1-201ENST00000457667 207 ntBASIC2.97□□□□□ -1.93
SSX4O60224 RN7SL594P-201ENST00000470590 287 ntBASIC2.97□□□□□ -1.93
SSX4O60224 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.97□□□□□ -1.93
SSX4O60224 RPS29P2-201ENST00000479278 136 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms