Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNU2-46P-201ENST00000517038 113 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 AC093012.1-202ENST00000549403 582 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 MTCO3P13-201ENST00000577757 781 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 AC103710.1-201ENST00000610003 901 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 AL158063.1-201ENST00000615349 536 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD8-MDP1E9PL57 ASNSP3-201ENST00000451989 1306 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD62.1-201ENST00000362541 86 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-270P-201ENST00000364131 105 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD116-9-201ENST00000384000 95 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD116-3-201ENST00000384287 95 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD116-7-201ENST00000384404 95 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD116-5-201ENST00000384462 95 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 MIR325-201ENST00000385260 98 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RPS3AP3-201ENST00000411933 242 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 HMGN1P14-201ENST00000412459 517 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 ATG3P1-201ENST00000419507 911 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC092047.1-201ENST00000424997 240 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 BNIP3P2-201ENST00000441221 577 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL39P40-201ENST00000445481 146 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC009961.3-201ENST00000449832 765 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 EEF1B2P7-201ENST00000451177 676 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD42A-201ENST00000459584 64 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC098799.2-201ENST00000509466 868 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC010486.1-201ENST00000511793 424 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-390P-201ENST00000516259 103 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-1282P-201ENST00000516735 96 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 ARL2BPP2-201ENST00000550907 489 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 MIR4435-1-201ENST00000582552 80 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC005771.1-201ENST00000585581 349 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 BNIP3P8-201ENST00000597863 560 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AL451064.1-201ENST00000607718 471 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AL359198.2-201ENST00000611836 194 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AL138880.2-201ENST00000616214 239 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC243829.7-201ENST00000633081 225 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 MTND1P37-201ENST00000636562 264 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 AC007785.2-201ENST00000598627 1916 ntBASIC2.71□□□□□ -1.98
NEDD8-MDP1E9PL57 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 Y_RNA.77-201ENST00000362962 107 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 U8.3-201ENST00000363321 132 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-14P-201ENST00000384630 106 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-248P-201ENST00000410720 107 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU2-62P-201ENST00000410868 191 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RN7SKP142-201ENST00000411236 328 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SPA17P1-201ENST00000416656 452 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 FCF1P1-201ENST00000432690 571 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SSXP1-201ENST00000453640 473 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SNRPFP4-201ENST00000456366 242 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RPS20P22-201ENST00000473700 357 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 MTND1P3-201ENST00000484956 952 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AC010587.1-201ENST00000505809 469 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AC091965.2-201ENST00000512324 613 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORA31.1-201ENST00000515993 133 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORA31.3-201ENST00000516029 96 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORA31.5-201ENST00000516190 133 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RNA5SP337-201ENST00000517007 109 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RN7SKP258-201ENST00000517151 304 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AMZ2P1-203ENST00000565833 850 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AC006338.1-201ENST00000618453 749 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms