Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RPS29P25-201ENST00000481709 171 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC091885.1-201ENST00000506658 268 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RNU4-29P-201ENST00000515943 174 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RN7SKP209-201ENST00000516888 304 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 MTND4P7-201ENST00000523876 130 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 SUB1P1-201ENST00000524415 382 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 MIR6500-201ENST00000622700 86 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 ASNSP3-201ENST00000451989 1306 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM4Q9Y4Z0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AL139039.1-201ENST00000401900 692 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AL606923.1-201ENST00000406616 190 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC007390.1-201ENST00000415722 356 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 ATP5JP1-201ENST00000431631 322 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 BRK1P2-201ENST00000442875 223 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 HMGB3P8-201ENST00000449709 577 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC010099.1-201ENST00000455434 375 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 SCARNA18-201ENST00000459004 134 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC139453.3-201ENST00000493276 369 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 RPL38P4-201ENST00000502376 214 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC009901.1-201ENST00000506703 541 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 MTCO3P9-201ENST00000506989 781 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 RN7SKP83-201ENST00000516512 178 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-703P-201ENST00000516946 107 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC087369.1-201ENST00000520775 996 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC091516.1-201ENST00000549191 703 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 MIR5692A1-201ENST00000580523 69 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 MIR548AC-201ENST00000585049 88 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 NRBF2P5-201ENST00000603087 788 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 SNORA51-201ENST00000606420 132 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 U2.21-201ENST00000637295 81 ntBASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LSM4Q9Y4Z0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 NACAP2-201ENST00000318548 624 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-884P-201ENST00000363889 107 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 SNORD46.1-201ENST00000364139 104 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNA5SP387-201ENST00000364226 106 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-213P-201ENST00000384051 104 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-38P-201ENST00000384085 107 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-393P-201ENST00000384475 107 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-1127P-201ENST00000384580 107 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 SNORD37.1-201ENST00000390968 65 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 Z98941.1-201ENST00000407764 100 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU4-6P-201ENST00000410804 122 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 MTND1P23-201ENST00000416931 372 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RNU6-333P-201ENST00000459117 107 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 snoU13.28-201ENST00000459235 104 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 HMGN2P13-201ENST00000476476 274 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 AC084198.1-201ENST00000477747 402 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 TRBV12-2-201ENST00000489763 344 ntBASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM4Q9Y4Z0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms