Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 SNORD19B-201ENST00000459623 84 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 MTND4P17-201ENST00000470444 350 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC010285.1-201ENST00000470580 392 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RPL7P43-201ENST00000478876 753 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 HMGB1P22-201ENST00000505315 124 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC104136.1-201ENST00000512969 394 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-256P-201ENST00000516747 97 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 SNORA25.17-201ENST00000517184 124 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 FRG2DP-202ENST00000566967 323 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RN7SL600P-201ENST00000581811 299 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 MIR3941-201ENST00000582572 103 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC004825.2-201ENST00000616634 455 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC126177.8-201ENST00000618339 1015 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 DEFB108F-201ENST00000344638 222 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.259-201ENST00000364619 101 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.394-201ENST00000383942 103 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 MIR450B-201ENST00000401182 78 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 MIR548K-201ENST00000408406 116 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 VN1R36P-201ENST00000414936 291 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 MTCO2P27-201ENST00000420740 428 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AL160275.3-201ENST00000423876 471 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AL591212.2-201ENST00000433923 257 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 RPS3AP52-201ENST00000435639 297 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC005019.1-201ENST00000436455 431 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 RNU7-167P-201ENST00000459160 62 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 DYNLL1P5-201ENST00000467158 270 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC108860.1-201ENST00000484521 383 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 RNU2-69P-201ENST00000516061 100 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-559P-201ENST00000516151 98 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC090115.3-201ENST00000553218 849 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC078795.3-201ENST00000602913 472 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 BRDTP1-201ENST00000605735 677 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AL133215.3-201ENST00000609801 448 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AMBRA1Q9C0C7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC106871.1-201ENST00000568324 3102 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.212-201ENST00000364177 102 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.315-201ENST00000365117 102 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AL590704.1-201ENST00000402856 794 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AL590004.1-201ENST00000405321 300 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 CYCSP19-201ENST00000411715 316 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 HSPE1P12-201ENST00000412576 301 ntBASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.66□□□□□ -1.82
AMBRA1Q9C0C7 AL669831.1-202ENST00000428504 417 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms