Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC009237.7-201ENST00000447357 229 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 MRPS10P1-201ENST00000448483 130 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 AC074290.1-201ENST00000448883 135 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 AL162739.1-201ENST00000450606 307 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 RNU1-88P-201ENST00000459274 128 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 MRPS33P2-201ENST00000507850 322 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 AC006499.6-201ENST00000511169 607 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 SNRPGP16-201ENST00000533275 226 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 NDUFB4P11-201ENST00000560510 395 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 RPL23AP88-201ENST00000605759 454 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 ADAM24P-201ENST00000398655 2101 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 AC114774.1-201ENST00000507410 1770 ntBASIC5.06□□□□□ -1.6
CNTNAP3Q9BZ76 AL731532.2-201ENST00000623542 1953 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 Y_RNA.182-201ENST00000363880 111 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 Y_RNA.420-201ENST00000384043 110 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-318P-201ENST00000384283 103 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 MIR600-201ENST00000385007 98 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-712P-201ENST00000410558 100 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AL590399.6-201ENST00000446396 307 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 SNORA59A-201ENST00000459326 152 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 snoU13.3-201ENST00000459441 104 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AC109327.1-201ENST00000471666 403 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 SNORD116-26-201ENST00000516006 96 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 MIR2117-201ENST00000516780 80 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AC023632.4-201ENST00000517783 191 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AC090616.3-201ENST00000582184 217 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 MIR3939-201ENST00000582614 106 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 MIR548AC-201ENST00000585049 88 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 BPIFA4P-203ENST00000603168 689 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AL161756.2-201ENST00000604597 246 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 RMST_4.1-201ENST00000616886 107 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 ZYXP1-201ENST00000617638 118 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AC112200.1-201ENST00000625015 234 ntBASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP3Q9BZ76 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 AC110491.1-201ENST00000562191 2010 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-1249P-201ENST00000363237 111 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-899P-201ENST00000363947 107 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RNU6-211P-201ENST00000384047 107 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 SNORA5.1-201ENST00000384275 131 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 U3.30-201ENST00000391308 210 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 MIR298-201ENST00000401212 88 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 AL732292.1-201ENST00000426692 226 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RPS23P2-201ENST00000463671 415 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RPL23AP2-201ENST00000471227 466 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RNU1-86P-201ENST00000516108 154 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 RNU1-107P-201ENST00000516617 154 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 TRAV28-201ENST00000557548 323 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 MIR6075-201ENST00000620782 95 ntBASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP3Q9BZ76 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms