Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 AC174048.1-201ENST00000603389 144 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AP001330.4-201ENST00000604350 154 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AL133255.1-201ENST00000606374 441 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AL022345.1-201ENST00000607292 135 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 Z82243.1-201ENST00000609432 473 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 uc_338.15-201ENST00000615470 191 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 MIR7153-201ENST00000637758 57 ntBASIC3.58□□□□□ -1.84
SNX18Q96RF0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.58□□□□□ -1.84
SNX18Q96RF0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNX18Q96RF0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNX18Q96RF0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNX18Q96RF0 MIR372-201ENST00000362225 67 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 RNA5SP283-201ENST00000365604 119 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 snosnR66.1-201ENST00000391095 99 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 CISD1P1-201ENST00000393907 327 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 POLHP1-201ENST00000411806 470 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AL354751.2-201ENST00000415471 210 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 RPL21P109-201ENST00000422213 475 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 snoU13.4-201ENST00000458916 104 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC092451.1-201ENST00000480211 153 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 AL049874.1-201ENST00000489560 388 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AL132838.2-201ENST00000492041 314 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 RNU6-677P-201ENST00000516914 101 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 AL138889.2-201ENST00000603883 242 ntBASIC3.57□□□□□ -1.84
SNX18Q96RF0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.57□□□□□ -1.84
SNX18Q96RF0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNX18Q96RF0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC121333.1-201ENST00000567488 2709 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX18Q96RF0 DEFB108F-201ENST00000344638 222 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 RNU6-288P-201ENST00000363690 104 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 RNU6-14P-201ENST00000384630 106 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 MIR134-201ENST00000385258 73 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 RNA5SP219-201ENST00000390940 113 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AL139039.1-201ENST00000401900 692 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AL445189.1-201ENST00000405722 338 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 HSPE1P12-201ENST00000412576 301 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 RPS15AP6-201ENST00000420703 385 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 RPL7P2-201ENST00000427639 268 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AL117339.2-201ENST00000430475 180 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 HMGB1P27-201ENST00000431429 603 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 TXNP1-201ENST00000441872 371 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC104058.1-201ENST00000448028 297 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 RNU6-953P-201ENST00000459154 107 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC078817.1-201ENST00000492623 435 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 OR11H5P-201ENST00000554039 926 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 MED28P6-201ENST00000558776 231 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC106782.4-201ENST00000568264 210 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 RN7SL600P-201ENST00000581811 299 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.56□□□□□ -1.84
SNX18Q96RF0 AC113139.1-201ENST00000605049 239 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 AL359547.2-201ENST00000615810 418 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNX18Q96RF0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX18Q96RF0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNX18Q96RF0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.56□□□□□ -1.84
SNX18Q96RF0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms