Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 RNVU1-3-201ENST00000364313 161 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 EI24P1-201ENST00000416584 867 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 RPL35AP21-201ENST00000437667 333 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 HSPE1P25-201ENST00000455484 251 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 RNU6-390P-201ENST00000516259 103 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 TRAV8-5-201ENST00000537369 341 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 AC120057.2-201ENST00000571520 271 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 LRRC37A5P-203ENST00000580181 585 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RC3H1Q5TC82 AC104260.2-201ENST00000623551 3497 ntBASIC5.78□□□□□ -1.48
RC3H1Q5TC82 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 CPHL1P-201ENST00000461341 3407 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 RPL9P7-201ENST00000330965 580 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.353-201ENST00000365440 108 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.358-201ENST00000365491 99 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 RNU6-44P-201ENST00000384045 107 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 MIR92A2-201ENST00000385299 75 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 RNU6-607P-201ENST00000411283 108 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AL513043.1-201ENST00000439124 535 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AL360271.2-201ENST00000447710 161 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 RNU6-953P-201ENST00000459154 107 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 RNU6-1037P-201ENST00000459571 107 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AP001324.2-201ENST00000461163 319 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 RPL9P9-202ENST00000466501 579 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AC140059.1-201ENST00000489238 361 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AP006245.1-201ENST00000522549 120 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 BDH2P1-201ENST00000602288 736 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AC240442.1-201ENST00000616055 283 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 MTND1P7-201ENST00000632801 297 ntBASIC5.77□□□□□ -1.49
RC3H1Q5TC82 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.77□□□□□ -1.49
RC3H1Q5TC82 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 RNU6-288P-201ENST00000363690 104 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 Y_RNA.441-201ENST00000384123 112 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 MIR521-1-201ENST00000384902 87 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 RNU6-131P-201ENST00000391144 107 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 MIR190B-201ENST00000401119 79 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 HSPE1P8-201ENST00000406997 288 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 SNORA11F-201ENST00000408237 128 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 CYCSP33-201ENST00000414485 327 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AL035461.1-201ENST00000421490 332 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 MTCO1P5-201ENST00000433573 344 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 RPS11P1-201ENST00000451072 473 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AC023424.1-201ENST00000496058 459 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 MIR4429-201ENST00000580105 73 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 AC113403.1-201ENST00000604910 193 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 MIR15A-201ENST00000607334 83 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 uc_338.13-201ENST00000618243 179 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 BTBD10P1-201ENST00000549824 1352 ntBASIC5.76□□□□□ -1.49
RC3H1Q5TC82 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RC3H1Q5TC82 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RC3H1Q5TC82 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms