Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RPL31P41-201ENST00000477967 372 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 RPL7P18-201ENST00000478965 734 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC090821.2-201ENST00000523552 176 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.13□□□□□ -2.23
ABCA4P78363 AC018618.2-201ENST00000604770 446 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC025588.2-201ENST00000604851 466 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.13□□□□□ -2.23
ABCA4P78363 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
ABCA4P78363 DEFB108F-201ENST00000344638 222 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 MIR421-201ENST00000365696 85 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 RNY1P4-201ENST00000384595 115 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 RN7SKP158-201ENST00000410453 326 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 SNRPGP13-201ENST00000442212 177 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 SNRPFP3-201ENST00000457792 225 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 KLF3P2-201ENST00000465138 268 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.13□□□□□ -2.23
ABCA4P78363 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.13□□□□□ -2.23
ABCA4P78363 Y_RNA.681-201ENST00000516445 113 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC022616.2-201ENST00000523185 300 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC083923.1-201ENST00000523708 376 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 DEFB108D-201ENST00000527787 222 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.13□□□□□ -2.23
ABCA4P78363 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.13□□□□□ -2.23
ABCA4P78363 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AC008749.1-201ENST00000597650 306 ntBASIC1.13□□□□□ -2.23
ABCA4P78363 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
ABCA4P78363 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
ABCA4P78363 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.12□□□□□ -2.23
ABCA4P78363 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 AL356379.1-201ENST00000414105 126 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 Z85995.1-201ENST00000415547 335 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC114801.2-201ENST00000503825 781 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC016957.1-201ENST00000534895 309 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC006213.4-201ENST00000616184 634 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 MTND2P41-201ENST00000637599 773 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ABCA4P78363 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ABCA4P78363 RNU6-272P-201ENST00000411028 104 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AC010385.1-201ENST00000412374 256 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 FGF7P5-201ENST00000441829 291 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 MTCO1P48-201ENST00000448024 1096 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 Z82190.1-201ENST00000454534 490 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AC022447.1-201ENST00000515358 464 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 SNORA31.25-201ENST00000517242 134 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC024619.4-201ENST00000580924 316 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.12□□□□□ -2.23
ABCA4P78363 AL137246.1-201ENST00000607072 977 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ABCA4P78363 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC011330.2-201ENST00000621680 635 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.12□□□□□ -2.23
ABCA4P78363 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.12□□□□□ -2.23
ABCA4P78363 AC116618.1-201ENST00000634617 774 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 AL590396.2-201ENST00000636511 1041 ntBASIC1.12□□□□□ -2.23
ABCA4P78363 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
ABCA4P78363 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 RNU4-41P-201ENST00000364426 143 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 RNU6-1105P-201ENST00000384774 107 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 U3.20-201ENST00000390909 217 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ABCA4P78363 SUMO2P12-201ENST00000405924 140 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 RNU6-564P-201ENST00000410983 104 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.11□□□□□ -2.23
ABCA4P78363 AC007098.1-201ENST00000420122 367 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.11□□□□□ -2.23
ABCA4P78363 RPL31P63-201ENST00000422565 375 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 MTCYBP3-201ENST00000445588 1137 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.11□□□□□ -2.23
ABCA4P78363 AC008837.2-201ENST00000513076 418 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 RN7SKP49-201ENST00000516675 260 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
ABCA4P78363 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.11□□□□□ -2.23
ABCA4P78363 AC010186.2-204ENST00000537668 439 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 HSPE1P3-201ENST00000559254 309 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ABCA4P78363 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.11□□□□□ -2.23
ABCA4P78363 AL162373.1-201ENST00000620433 407 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 AC091932.3-201ENST00000624223 323 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 AC119674.1-220ENST00000641502 1048 ntBASIC1.11□□□□□ -2.23
ABCA4P78363 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ABCA4P78363 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ABCA4P78363 Y_RNA.68-201ENST00000362881 102 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 EDDM3CP-201ENST00000415977 425 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.1□□□□□ -2.23
ABCA4P78363 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.1□□□□□ -2.23
ABCA4P78363 AL714022.1-201ENST00000439897 151 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC055731.1-201ENST00000474387 401 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC116337.2-201ENST00000477662 156 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 RPL30P5-201ENST00000494923 336 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms