Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 NUP35P1-201ENST00000422734 947 ntBASIC0.94□□□□□ -2.26
RPS28P62857 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.94□□□□□ -2.26
RPS28P62857 AL135790.2-201ENST00000437701 267 ntBASIC0.94□□□□□ -2.26
RPS28P62857 RPS29P7-201ENST00000439662 171 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC245517.4-201ENST00000448601 281 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.94□□□□□ -2.26
RPS28P62857 MEMO1P3-201ENST00000459811 302 ntBASIC0.94□□□□□ -2.26
RPS28P62857 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC091860.1-201ENST00000505723 432 ntBASIC0.94□□□□□ -2.26
RPS28P62857 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RPS28P62857 AC008549.1-201ENST00000512900 643 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 AP000763.2-201ENST00000540641 163 ntBASIC0.94□□□□□ -2.26
RPS28P62857 MRPS36P5-201ENST00000551909 298 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC104581.2-201ENST00000572227 430 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC133794.1-201ENST00000602731 914 ntBASIC0.94□□□□□ -2.26
RPS28P62857 SDR42E1P1-201ENST00000611327 477 ntBASIC0.94□□□□□ -2.26
RPS28P62857 AC084824.4-201ENST00000620106 731 ntBASIC0.94□□□□□ -2.26
RPS28P62857 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.93□□□□□ -2.26
RPS28P62857 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RPS28P62857 RNU6-1078P-201ENST00000364522 103 ntBASIC0.93□□□□□ -2.26
RPS28P62857 MIR618-201ENST00000385287 98 ntBASIC0.93□□□□□ -2.26
RPS28P62857 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RPS28P62857 SNRPEP2-201ENST00000397592 279 ntBASIC0.93□□□□□ -2.26
RPS28P62857 MIR1262-201ENST00000408276 93 ntBASIC0.93□□□□□ -2.26
RPS28P62857 NFU1P1-201ENST00000413128 774 ntBASIC0.93□□□□□ -2.26
RPS28P62857 RPS29P4-201ENST00000414733 161 ntBASIC0.93□□□□□ -2.26
RPS28P62857 MTND4LP14-201ENST00000429447 288 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.93□□□□□ -2.26
RPS28P62857 MTCYBP11-201ENST00000447254 1109 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AC108938.1-201ENST00000451204 136 ntBASIC0.93□□□□□ -2.26
RPS28P62857 TEX41-209ENST00000451478 452 ntTSL 2 BASIC0.93□□□□□ -2.26
RPS28P62857 AC013267.1-201ENST00000458227 267 ntBASIC0.93□□□□□ -2.26
RPS28P62857 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
RPS28P62857 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC0.93□□□□□ -2.26
RPS28P62857 AC093801.2-201ENST00000503966 1050 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.93□□□□□ -2.26
RPS28P62857 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC0.93□□□□□ -2.26
RPS28P62857 AC107393.1-201ENST00000512403 346 ntBASIC0.93□□□□□ -2.26
RPS28P62857 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC0.93□□□□□ -2.26
RPS28P62857 MTCO1P35-201ENST00000515270 228 ntBASIC0.93□□□□□ -2.26
RPS28P62857 RNU6-586P-201ENST00000517265 104 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AC103833.1-201ENST00000517442 172 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AC027309.2-201ENST00000520566 192 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.93□□□□□ -2.26
RPS28P62857 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.93□□□□□ -2.26
RPS28P62857 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.93□□□□□ -2.26
RPS28P62857 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.93□□□□□ -2.26
RPS28P62857 AC124283.4-201ENST00000581815 456 ntBASIC0.93□□□□□ -2.26
RPS28P62857 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
RPS28P62857 MIR5096-201ENST00000583713 70 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AL139344.1-201ENST00000605228 195 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AL160281.1-201ENST00000605307 311 ntBASIC0.93□□□□□ -2.26
RPS28P62857 AC016769.4-201ENST00000616893 535 ntBASIC0.93□□□□□ -2.26
RPS28P62857 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RPS28P62857 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RPS28P62857 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
RPS28P62857 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPS28P62857 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPS28P62857 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.92□□□□□ -2.26
RPS28P62857 MIR372-201ENST00000362225 67 ntBASIC0.92□□□□□ -2.26
RPS28P62857 RNU1-58P-201ENST00000362413 163 ntBASIC0.92□□□□□ -2.26
RPS28P62857 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
RPS28P62857 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
RPS28P62857 MIR221-201ENST00000385135 110 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AL031679.1-201ENST00000400616 525 ntBASIC0.92□□□□□ -2.26
RPS28P62857 TXNP7-201ENST00000406296 293 ntBASIC0.92□□□□□ -2.26
RPS28P62857 RNU2-41P-201ENST00000410991 178 ntBASIC0.92□□□□□ -2.26
RPS28P62857 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPS28P62857 AC007435.1-201ENST00000421086 415 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AL590762.4-201ENST00000425885 253 ntBASIC0.92□□□□□ -2.26
RPS28P62857 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC0.92□□□□□ -2.26
RPS28P62857 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC0.92□□□□□ -2.26
RPS28P62857 AC007000.2-201ENST00000442564 487 ntBASIC0.92□□□□□ -2.26
RPS28P62857 PDSS1P2-201ENST00000449397 678 ntBASIC0.92□□□□□ -2.26
RPS28P62857 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPS28P62857 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.92□□□□□ -2.26
RPS28P62857 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC0.92□□□□□ -2.26
RPS28P62857 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.92□□□□□ -2.26
RPS28P62857 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.92□□□□□ -2.26
RPS28P62857 RPS15AP36-201ENST00000492022 382 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC0.92□□□□□ -2.26
RPS28P62857 AC021269.2-201ENST00000532318 330 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.92□□□□□ -2.26
RPS28P62857 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.92□□□□□ -2.26
RPS28P62857 AC090115.3-201ENST00000553218 849 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.92□□□□□ -2.26
RPS28P62857 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC0.92□□□□□ -2.26
RPS28P62857 AL035411.2-201ENST00000604022 421 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AC010900.2-201ENST00000604508 210 ntBASIC0.92□□□□□ -2.26
RPS28P62857 MESTIT1_2.1-201ENST00000616328 235 ntBASIC0.92□□□□□ -2.26
RPS28P62857 AC091965.5-201ENST00000624785 342 ntBASIC0.92□□□□□ -2.26
RPS28P62857 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC0.92□□□□□ -2.26
RPS28P62857 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RPS28P62857 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms