Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RN7SL807P-201ENST00000470923 297 ntBASIC2.97□□□□□ -1.93
CDH11P55287 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH11P55287 AC126182.1-201ENST00000478134 357 ntBASIC2.97□□□□□ -1.93
CDH11P55287 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH11P55287 AC009646.1-201ENST00000510455 318 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AC011352.1-201ENST00000512300 793 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AC010493.1-201ENST00000513479 292 ntBASIC2.97□□□□□ -1.93
CDH11P55287 APOOP4-201ENST00000513530 597 ntBASIC2.97□□□□□ -1.93
CDH11P55287 RNU6-927P-201ENST00000516199 100 ntBASIC2.97□□□□□ -1.93
CDH11P55287 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH11P55287 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.97□□□□□ -1.93
CDH11P55287 AP003034.1-201ENST00000534621 422 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH11P55287 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH11P55287 AC005476.1-201ENST00000554427 397 ntBASIC2.97□□□□□ -1.93
CDH11P55287 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH11P55287 AC055876.1-202ENST00000567053 138 ntBASIC2.97□□□□□ -1.93
CDH11P55287 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH11P55287 DPPA3P3-201ENST00000603842 430 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AC007363.1-201ENST00000604736 620 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AP001330.5-201ENST00000607176 411 ntBASIC2.97□□□□□ -1.93
CDH11P55287 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH11P55287 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH11P55287 AC090517.2-201ENST00000614966 680 ntBASIC2.97□□□□□ -1.93
CDH11P55287 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH11P55287 U4.5-201ENST00000617137 123 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AC026585.1-201ENST00000619582 524 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AL356321.1-201ENST00000621360 228 ntBASIC2.97□□□□□ -1.93
CDH11P55287 FRG1KP-201ENST00000623592 341 ntBASIC2.97□□□□□ -1.93
CDH11P55287 AC005609.4-201ENST00000625071 447 ntBASIC2.97□□□□□ -1.93
CDH11P55287 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH11P55287 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH11P55287 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH11P55287 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CDH11P55287 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH11P55287 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CDH11P55287 AC093010.3-201ENST00000570269 15214 ntBASIC2.97□□□□□ -1.93
CDH11P55287 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDH11P55287 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
CDH11P55287 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
CDH11P55287 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
CDH11P55287 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH11P55287 AC008568.2-201ENST00000623862 2313 ntBASIC2.96□□□□□ -1.94
CDH11P55287 RNU6-1120P-201ENST00000362988 108 ntBASIC2.96□□□□□ -1.94
CDH11P55287 U3.6-201ENST00000363622 211 ntBASIC2.96□□□□□ -1.94
CDH11P55287 RNU6-946P-201ENST00000383878 107 ntBASIC2.96□□□□□ -1.94
CDH11P55287 RNU6-780P-201ENST00000391030 104 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MIR548F1-201ENST00000408667 84 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MIR1290-201ENST00000408735 78 ntBASIC2.96□□□□□ -1.94
CDH11P55287 RNU2-39P-201ENST00000410604 198 ntBASIC2.96□□□□□ -1.94
CDH11P55287 RNA5SP120-201ENST00000410900 112 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH11P55287 FCF1P9-201ENST00000412546 282 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.96□□□□□ -1.94
CDH11P55287 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH11P55287 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH11P55287 TIMM9P3-201ENST00000428659 274 ntBASIC2.96□□□□□ -1.94
CDH11P55287 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.96□□□□□ -1.94
CDH11P55287 TAAR7P-201ENST00000436141 242 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH11P55287 AC003071.1-201ENST00000451219 789 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC013267.1-201ENST00000458227 267 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC093663.1-201ENST00000497190 394 ntBASIC2.96□□□□□ -1.94
CDH11P55287 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH11P55287 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH11P55287 RNU6-1256P-201ENST00000516539 103 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AP001646.1-201ENST00000527936 915 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH11P55287 OR5B19P-201ENST00000531766 928 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AK6P1-201ENST00000540219 478 ntBASIC2.96□□□□□ -1.94
CDH11P55287 ZNF519P2-201ENST00000557032 169 ntBASIC2.96□□□□□ -1.94
CDH11P55287 RPL23AP84-201ENST00000571193 464 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MIR3200-201ENST00000580767 85 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MIR4276-201ENST00000584832 70 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC107304.1-201ENST00000604229 296 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC126118.1-201ENST00000607744 628 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AL591516.1-201ENST00000611326 274 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AP001486.3-201ENST00000615334 372 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH11P55287 CR381653.2-201ENST00000624041 768 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC091903.1-201ENST00000624322 454 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MIR3651-201ENST00000630427 90 ntBASIC2.96□□□□□ -1.94
CDH11P55287 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
CDH11P55287 AC002546.1-201ENST00000588041 2504 ntBASIC2.96□□□□□ -1.94
CDH11P55287 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.95□□□□□ -1.94
CDH11P55287 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDH11P55287 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH11P55287 AC027514.1-201ENST00000588561 1603 ntBASIC2.95□□□□□ -1.94
CDH11P55287 RNU1-70P-201ENST00000362618 164 ntBASIC2.95□□□□□ -1.94
CDH11P55287 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CDH11P55287 Y_RNA.409-201ENST00000383990 98 ntBASIC2.95□□□□□ -1.94
CDH11P55287 MIR493-201ENST00000385254 89 ntBASIC2.95□□□□□ -1.94
CDH11P55287 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CDH11P55287 AC068050.1-201ENST00000394891 380 ntBASIC2.95□□□□□ -1.94
CDH11P55287 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH11P55287 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH11P55287 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH11P55287 USP9YP28-201ENST00000435142 589 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms