Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 Y_RNA.789-201ENST00000622480 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PRIM1P49642 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
PRIM1P49642 AC004817.4-201ENST00000602396 3625 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
PRIM1P49642 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.29□□□□□ -1.4
PRIM1P49642 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PRIM1P49642 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PRIM1P49642 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
PRIM1P49642 SNORA25.1-201ENST00000362326 128 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 Y_RNA.343-201ENST00000365354 112 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PRIM1P49642 RNU6-102P-201ENST00000384485 104 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 CTSL3P-202ENST00000412179 788 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.28□□□□□ -1.4
PRIM1P49642 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.28□□□□□ -1.4
PRIM1P49642 FTLP19-201ENST00000433300 394 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC6.28□□□□□ -1.4
PRIM1P49642 Y_RNA.638-201ENST00000459374 113 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AC109327.1-201ENST00000471666 403 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AC023424.1-201ENST00000496058 459 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AK3P2-201ENST00000507976 429 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AC091868.1-201ENST00000508746 304 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.28□□□□□ -1.4
PRIM1P49642 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.28□□□□□ -1.4
PRIM1P49642 SRGNP1-201ENST00000603392 451 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 AL078605.1-201ENST00000603529 500 ntBASIC6.28□□□□□ -1.4
PRIM1P49642 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PRIM1P49642 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PRIM1P49642 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PRIM1P49642 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
PRIM1P49642 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC6.27□□□□□ -1.41
PRIM1P49642 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PRIM1P49642 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PRIM1P49642 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PRIM1P49642 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PRIM1P49642 Y_RNA.275-201ENST00000364726 110 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 RNU6-959P-201ENST00000384671 107 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 RNU6-1154P-201ENST00000391001 104 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 RNU6-837P-201ENST00000391056 108 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.27□□□□□ -1.41
PRIM1P49642 RPL23AP36-201ENST00000413895 458 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 RPS17P2-201ENST00000461663 408 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.27□□□□□ -1.41
PRIM1P49642 RPL37P6-202ENST00000464216 403 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 MTND5P41-201ENST00000517498 206 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 AP005660.1-201ENST00000522972 293 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 AP000859.1-201ENST00000525536 307 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 AC023824.2-201ENST00000566185 400 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.27□□□□□ -1.41
PRIM1P49642 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.27□□□□□ -1.41
PRIM1P49642 BX322639.1-202ENST00000423987 2213 ntBASIC6.27□□□□□ -1.41
PRIM1P49642 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.27□□□□□ -1.41
PRIM1P49642 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.27□□□□□ -1.41
PRIM1P49642 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PRIM1P49642 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.27□□□□□ -1.41
PRIM1P49642 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.27□□□□□ -1.41
PRIM1P49642 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PRIM1P49642 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6.26□□□□□ -1.41
PRIM1P49642 OR56B2P-202ENST00000641377 2453 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PRIM1P49642 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 RNU4-9P-201ENST00000364951 139 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 SNORA37-201ENST00000384504 129 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 Y_RNA.569-201ENST00000384749 103 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 RNU6-882P-201ENST00000391025 103 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 SNORA57.1-201ENST00000391227 145 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 AL390729.2-201ENST00000416137 156 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 SSXP9-201ENST00000417503 292 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 AC140479.3-201ENST00000418944 1126 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.26□□□□□ -1.41
PRIM1P49642 AL358453.1-201ENST00000422522 250 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 RPL23AP45-201ENST00000476406 468 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 RPL21P13-201ENST00000488305 481 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 SNORD116-28-201ENST00000516123 91 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 SNORA31.22-201ENST00000517204 135 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 AC007224.1-201ENST00000564410 144 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 MIR5699-201ENST00000578903 90 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.26□□□□□ -1.41
PRIM1P49642 AL645944.1-201ENST00000603857 493 ntBASIC6.26□□□□□ -1.41
PRIM1P49642 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
PRIM1P49642 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.26□□□□□ -1.41
PRIM1P49642 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
PRIM1P49642 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PRIM1P49642 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PRIM1P49642 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PRIM1P49642 AC008725.1-201ENST00000605123 2263 ntBASIC6.25□□□□□ -1.41
PRIM1P49642 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PRIM1P49642 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PRIM1P49642 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PRIM1P49642 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms