Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RNU6-407P-201ENST00000365280 104 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 SNORA66-201ENST00000384792 133 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 MIR487A-201ENST00000385009 80 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 RNU2-68P-201ENST00000410878 191 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 RN7SKP284-201ENST00000411002 343 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 AL160275.2-201ENST00000412010 394 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
COL9A1P20849 AL121914.1-201ENST00000450188 156 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 TRBV5-2-201ENST00000489095 273 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.62□□□□□ -1.51
COL9A1P20849 RNA5SP464-201ENST00000516251 108 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 HMGB1P40-201ENST00000525121 540 ntBASIC5.62□□□□□ -1.51
COL9A1P20849 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.62□□□□□ -1.51
COL9A1P20849 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL9A1P20849 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.62□□□□□ -1.51
COL9A1P20849 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COL9A1P20849 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL9A1P20849 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL9A1P20849 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL9A1P20849 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL9A1P20849 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.62□□□□□ -1.51
COL9A1P20849 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.62□□□□□ -1.51
COL9A1P20849 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL9A1P20849 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.62□□□□□ -1.51
COL9A1P20849 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 MIR133B-201ENST00000362210 119 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 RNA5SP31-201ENST00000411144 127 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 RPL21P66-201ENST00000426566 466 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.61□□□□□ -1.51
COL9A1P20849 RNU6-1007P-201ENST00000516586 107 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 SNORA67.7-201ENST00000516664 135 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.61□□□□□ -1.51
COL9A1P20849 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 Y_RNA.757-201ENST00000578934 114 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 MIR4444-1-201ENST00000581696 74 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 MIR4444-2-201ENST00000584390 74 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.61□□□□□ -1.51
COL9A1P20849 AL391261.4-201ENST00000616012 481 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 AC100757.1-201ENST00000616872 1835 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 AC099654.7-201ENST00000635788 2127 ntBASIC5.61□□□□□ -1.51
COL9A1P20849 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.61□□□□□ -1.51
COL9A1P20849 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL9A1P20849 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL9A1P20849 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COL9A1P20849 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
COL9A1P20849 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.6□□□□□ -1.51
COL9A1P20849 SNORD46.1-201ENST00000364139 104 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 SNORA25.7-201ENST00000364375 127 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 Y_RNA.293-201ENST00000364908 93 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 SNORA70H-201ENST00000383910 135 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 SNORA70J-201ENST00000384182 135 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 MIR551A-201ENST00000385042 96 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 AL078599.1-201ENST00000402075 293 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 AL356867.1-201ENST00000429623 299 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.6□□□□□ -1.51
COL9A1P20849 AC009127.1-201ENST00000467090 155 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 RPL30P12-201ENST00000474666 353 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.6□□□□□ -1.51
COL9A1P20849 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.6□□□□□ -1.51
COL9A1P20849 MIR5688-201ENST00000580619 83 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 AP002826.1-201ENST00000608835 315 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.6□□□□□ -1.51
COL9A1P20849 AL773545.4-201ENST00000637262 310 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 AL513478.4-201ENST00000641636 310 ntBASIC5.6□□□□□ -1.51
COL9A1P20849 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COL9A1P20849 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL9A1P20849 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.6□□□□□ -1.51
COL9A1P20849 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL9A1P20849 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.59□□□□□ -1.51
COL9A1P20849 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.59□□□□□ -1.51
COL9A1P20849 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL9A1P20849 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL9A1P20849 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms