Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 BPY2DP-201ENST00000422208 265 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
SLC28A1O00337 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.65□□□□□ -1.99
SLC28A1O00337 MTND4P25-201ENST00000441039 533 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 UBE2D3P4-201ENST00000441973 436 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 RPL23AP20-201ENST00000447965 421 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 ST13P20-201ENST00000447996 1065 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC28A1O00337 RNU6-953P-201ENST00000459154 107 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.65□□□□□ -1.99
SLC28A1O00337 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 RNU1-103P-201ENST00000516502 125 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 RNU6-1092P-201ENST00000516955 87 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC28A1O00337 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC28A1O00337 AC145350.1-201ENST00000567426 208 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC28A1O00337 AC104763.2-201ENST00000604179 382 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AC112191.3-201ENST00000604371 277 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AL137843.1-201ENST00000605078 385 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AC019159.1-201ENST00000605094 187 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AC103710.2-201ENST00000609912 942 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AL603755.1-201ENST00000619504 163 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AC009878.1-201ENST00000621819 340 ntBASIC2.65□□□□□ -1.99
SLC28A1O00337 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC28A1O00337 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SLC28A1O00337 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
SLC28A1O00337 ELF2P3-201ENST00000445099 1506 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SLC28A1O00337 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC28A1O00337 Z82195.2-201ENST00000612348 18351 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AL137003.2-201ENST00000606924 2538 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.64□□□□□ -1.99
SLC28A1O00337 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SLC28A1O00337 RNU5E-6P-201ENST00000365574 115 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.64□□□□□ -1.99
SLC28A1O00337 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC28A1O00337 MRPL42P2-201ENST00000403169 426 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.64□□□□□ -1.99
SLC28A1O00337 RPL35AP12-201ENST00000425362 338 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AL356583.2-201ENST00000426536 280 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AL451062.2-201ENST00000427515 271 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AC119618.1-201ENST00000434191 222 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AC098831.1-201ENST00000440661 216 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 MRPL50P4-201ENST00000446432 475 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC28A1O00337 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC128713.1-201ENST00000471495 306 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 MTND1P3-201ENST00000484956 952 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AC109486.1-201ENST00000486833 374 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC28A1O00337 RPL39P36-201ENST00000490784 156 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC28A1O00337 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 RNU6-143P-201ENST00000516942 93 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.64□□□□□ -1.99
SLC28A1O00337 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 GLYCAM1-201ENST00000546596 285 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SLC28A1O00337 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC28A1O00337 NIFKP6-201ENST00000598115 845 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC012360.2-201ENST00000609349 391 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC007998.5-201ENST00000622938 237 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC004777.1-201ENST00000624317 287 ntBASIC2.64□□□□□ -1.99
SLC28A1O00337 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC28A1O00337 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SLC28A1O00337 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.63□□□□□ -1.99
SLC28A1O00337 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC28A1O00337 RNU6-288P-201ENST00000363690 104 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 SMIM11P1-201ENST00000369586 178 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 RNU6-750P-201ENST00000390946 107 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC28A1O00337 FO393413.1-201ENST00000402892 195 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 EEF1A1P41-201ENST00000414667 207 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC28A1O00337 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC28A1O00337 RPL7P34-201ENST00000433316 712 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 HMGB3P12-201ENST00000438745 556 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC28A1O00337 COX6CP12-201ENST00000446748 202 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC28A1O00337 AL139824.2-201ENST00000458731 1095 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 AC126182.1-201ENST00000478134 357 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 RNA5SP341-201ENST00000516261 117 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 SNORA74D-201ENST00000516404 141 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 RNA5SP337-201ENST00000517007 109 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.63□□□□□ -1.99
SLC28A1O00337 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC28A1O00337 AP003181.2-201ENST00000528941 181 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 AC022878.1-201ENST00000530684 149 ntBASIC2.63□□□□□ -1.99
SLC28A1O00337 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms