Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 NACAP2-201ENST00000318548 624 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-512P-201ENST00000364438 103 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 SNORA62.3-201ENST00000365110 153 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-14P-201ENST00000384630 106 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 SNORA48.7-201ENST00000391302 135 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 SNORA48.8-201ENST00000391324 134 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 EI24P2-201ENST00000397776 1076 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AL391417.1-201ENST00000404100 426 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 U3.39-201ENST00000408569 239 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 U3.42-201ENST00000408746 214 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-387P-201ENST00000411331 105 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RPS12P24-201ENST00000412619 387 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RPL30P2-201ENST00000414021 291 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC092809.3-201ENST00000415453 231 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 PIGFP3-201ENST00000441918 722 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AL590664.1-201ENST00000448065 339 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 NFU1P2-201ENST00000448700 469 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 HMGB3P8-201ENST00000449709 577 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 SNORA31.3-201ENST00000516029 96 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-143P-201ENST00000516942 93 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC022893.3-201ENST00000607665 437 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC012409.4-201ENST00000612923 249 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC034102.8-201ENST00000615146 484 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AL359547.2-201ENST00000615810 418 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AL356321.1-201ENST00000621360 228 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC011155.2-201ENST00000623202 216 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 MTND5P42-201ENST00000637720 498 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 AC006020.1-201ENST00000420179 1854 ntBASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN16Q9Y5I7 MTND4P14-201ENST00000435799 1354 ntBASIC3.34□□□□□ -1.88
CLDN16Q9Y5I7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.34□□□□□ -1.88
CLDN16Q9Y5I7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
CLDN16Q9Y5I7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RNA5SP119-201ENST00000362715 117 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-741P-201ENST00000383889 107 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RNU6-116P-201ENST00000384042 109 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AL109913.1-201ENST00000421173 514 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 CALM2P2-201ENST00000428512 440 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 GTF2IP20-201ENST00000431663 360 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 TAAR7P-201ENST00000436141 242 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 HSPD1P21-201ENST00000436541 245 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 CACYBPP2-201ENST00000453625 678 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC087588.1-201ENST00000462203 316 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RPS20P22-201ENST00000473700 357 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AL160314.1-201ENST00000490836 438 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 RNA5SP290-201ENST00000517133 127 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AL121576.1-201ENST00000556055 276 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC234778.2-201ENST00000566241 354 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 BNIP3P9-201ENST00000603714 553 ntBASIC3.33□□□□□ -1.88
CLDN16Q9Y5I7 AC008945.2-201ENST00000606056 604 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms