Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 AL591034.2-201ENST00000402839 359 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 HSPE1P8-201ENST00000406997 288 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RNU6-130P-201ENST00000411112 103 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RPS12P10-201ENST00000427031 377 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RPS27AP12-201ENST00000429552 465 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RPEP5-201ENST00000441137 268 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RN7SL354P-201ENST00000469282 294 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RNU6-182P-201ENST00000516970 105 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 AC144568.1-201ENST00000520139 137 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 AP001781.1-201ENST00000530977 207 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 AP001282.2-201ENST00000616149 309 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RMST_4.1-201ENST00000616886 107 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 SNORD39.4-201ENST00000620099 78 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 MIR6730-201ENST00000622213 67 ntBASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AP4E1Q9UPM8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 RNU6-212P-201ENST00000362642 104 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 Y_RNA.180-201ENST00000363867 113 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 Y_RNA.324-201ENST00000365165 102 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 U8.8-201ENST00000365399 135 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 SNORA70F-201ENST00000384142 135 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 Y_RNA.471-201ENST00000384312 102 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 SDHCP2-201ENST00000398565 501 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AL513475.1-201ENST00000406602 315 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 MIR548H3-201ENST00000408771 118 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 RNU2-14P-201ENST00000411053 191 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 RPL7AP73-201ENST00000413490 353 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AC063979.1-201ENST00000415539 377 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AC092573.2-201ENST00000434546 243 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AC073264.2-201ENST00000448886 166 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 TPT1P13-201ENST00000449760 499 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AC008716.1-201ENST00000511084 513 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 RNU6-840P-201ENST00000517275 65 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AC008489.1-201ENST00000524271 483 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 RPL7P50-201ENST00000600588 727 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 MIR6780A-201ENST00000615089 68 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 AC091905.2-201ENST00000623143 306 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 CPHL1P-201ENST00000461341 3407 ntBASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.7□□□□□ -1.66
AP4E1Q9UPM8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 SNORD113.2-201ENST00000364166 89 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 RNVU1-6-201ENST00000364688 164 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 RNU1-63P-201ENST00000383902 164 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 RNU2-33P-201ENST00000410344 192 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 EIF4EP2-201ENST00000422816 654 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 HMGB1P27-201ENST00000431429 603 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 PTMAP3-201ENST00000447474 330 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 NIP7P2-201ENST00000485801 544 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AC108022.1-201ENST00000493466 478 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 RNU1-86P-201ENST00000516108 154 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 RNU1-107P-201ENST00000516617 154 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 SNORA81.3-201ENST00000517283 198 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AC067852.4-201ENST00000590314 478 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 BPIFA4P-203ENST00000603168 689 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AL121917.1-203ENST00000605534 577 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 ASNSP1-201ENST00000518311 1939 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 SCN1A-220ENST00000641603 12506 ntBASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.69□□□□□ -1.66
AP4E1Q9UPM8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms