Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 AC104090.1-201ENST00000506341 1171 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 HSPE1P23-201ENST00000509838 286 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 MTND5P13-201ENST00000513046 1079 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 RNA5SP216-201ENST00000516111 123 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 SCARNA15.2-201ENST00000516409 127 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLIP2Q9UDT6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 NDUFAF4P1-201ENST00000559425 519 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 AC012213.3-201ENST00000577199 777 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 AL161734.1-201ENST00000609720 557 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLIP2Q9UDT6 SNHG22-203ENST00000617833 660 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 AL603755.1-201ENST00000619504 163 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 AC008443.7-201ENST00000622195 246 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 AC007490.1-201ENST00000624321 703 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 AC093536.2-201ENST00000565257 1406 ntBASIC3□□□□□ -1.93
CLIP2Q9UDT6 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RNU6-744P-201ENST00000365557 107 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 XGY1-201ENST00000381172 446 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RNU6-637P-201ENST00000384050 107 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RNU6-1316P-201ENST00000384242 108 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 MIR514A1-201ENST00000385133 98 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL445529.1-201ENST00000398713 389 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL356421.1-201ENST00000403255 413 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 MTND1P21-201ENST00000412991 285 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC018630.2-202ENST00000422992 927 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RPL7L1P10-201ENST00000427790 463 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL590383.1-201ENST00000428602 75 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC009237.8-201ENST00000445492 379 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 CACYBPP2-201ENST00000453625 678 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RN7SKP24-201ENST00000515888 284 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RNU5A-4P-201ENST00000516588 111 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 SNORA31.15-201ENST00000516771 132 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 RN7SKP40-201ENST00000517211 242 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AP001646.1-201ENST00000527936 915 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 ACTR3BP3-201ENST00000565577 979 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC008739.2-201ENST00000597006 317 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC024560.3-201ENST00000608482 349 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC104073.3-201ENST00000610942 955 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 HULC.1-201ENST00000612720 240 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC009268.2-201ENST00000621925 457 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 FO624990.1-201ENST00000636373 85 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 AC010680.1-201ENST00000590024 3590 ntBASIC2.99□□□□□ -1.93
CLIP2Q9UDT6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 RNU6-198P-201ENST00000384258 104 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 MIR627-201ENST00000384979 97 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 RNA5SP210-201ENST00000391034 120 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 MTND1P32-201ENST00000433043 938 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 MTCO1P27-201ENST00000448269 226 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 HMGB1P36-201ENST00000487709 576 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 RPS27P27-201ENST00000498779 255 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC147055.4-201ENST00000504399 745 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC123904.3-201ENST00000547218 814 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AMZ2P1-203ENST00000565833 850 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.98□□□□□ -1.93
CLIP2Q9UDT6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms