Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC097713.2-201ENST00000430199 356 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SEPT14P3-201ENST00000439401 183 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AL732372.2-207ENST00000445840 183 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 MTND3P10-201ENST00000450967 341 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SNRPGP6-201ENST00000451124 220 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SSXP4-201ENST00000451349 245 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SEPT14P2-201ENST00000453405 183 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AL356010.1-201ENST00000456364 102 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SNORD97-201ENST00000459187 142 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 RPS29P25-201ENST00000481709 171 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SEPT14P4-201ENST00000513445 186 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SNORD27.1-201ENST00000516319 72 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SNORA40.12-201ENST00000516329 111 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 NRON-201ENST00000517270 370 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 HMGB1P41-201ENST00000520234 440 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 FO082796.1-201ENST00000523795 183 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC123904.3-201ENST00000547218 814 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 MIR4513-201ENST00000581077 86 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 YWHAEP7-203ENST00000622054 312 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 Y_RNA.22-201ENST00000362492 102 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 Y_RNA.367-201ENST00000365544 101 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNU4-48P-201ENST00000365559 182 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 Y_RNA.381-201ENST00000365666 102 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNU6-741P-201ENST00000383889 107 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 SNORA69-201ENST00000383895 132 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AL513331.1-201ENST00000411908 397 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 OR51A5P-201ENST00000415429 942 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC016691.1-201ENST00000441321 413 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC009237.8-201ENST00000445492 379 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNU7-63P-201ENST00000459054 62 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC126389.1-201ENST00000477436 290 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNU6-835P-201ENST00000516974 104 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC022690.1-201ENST00000526681 550 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC093012.1-202ENST00000549403 582 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 ARL2BPP2-201ENST00000550907 489 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AF038458.1-201ENST00000588406 262 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RNVU1-4-201ENST00000612985 164 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 AC010133.1-201ENST00000615809 842 ntBASIC3.78□□□□□ -1.8
VPS45Q9NRW7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS45Q9NRW7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 TPTE2P4-201ENST00000258589 1605 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC006504.1-201ENST00000562493 3666 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC073343.1-201ENST00000328239 651 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 RNY3P3-201ENST00000363816 102 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 RPS4XP3-201ENST00000398541 413 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AL359634.1-202ENST00000404721 284 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 RNU2-36P-201ENST00000410361 191 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC138393.2-201ENST00000414742 246 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AL451054.2-201ENST00000420896 202 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC245054.1-201ENST00000420944 258 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 GTF2IP20-201ENST00000431663 360 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC073063.1-201ENST00000434352 607 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AL590664.1-201ENST00000448065 339 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS45Q9NRW7 AC004801.2-202ENST00000463559 283 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 RN7SL807P-201ENST00000470923 297 ntBASIC3.77□□□□□ -1.81
VPS45Q9NRW7 RPL7P47-201ENST00000497299 556 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms