Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
DUSP9Q99956 RNU1-15P-201ENST00000353977 144 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 SNORA31-201ENST00000362607 130 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 Y_RNA.148-201ENST00000363557 117 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 Y_RNA.151-201ENST00000363566 112 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DUSP9Q99956 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.84□□□□□ -1.63
DUSP9Q99956 AL096701.2-201ENST00000416920 238 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 MCFD2P1-201ENST00000417812 300 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 TOMM20P4-201ENST00000427861 435 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 VDAC1P3-201ENST00000434069 851 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.84□□□□□ -1.63
DUSP9Q99956 MTND3P2-201ENST00000438452 342 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.84□□□□□ -1.63
DUSP9Q99956 DAP3P1-201ENST00000441522 278 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DUSP9Q99956 MTND5P22-201ENST00000458380 195 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 RN7SL354P-201ENST00000469282 294 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 AC018437.1-201ENST00000492214 406 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 HMGN1P11-201ENST00000508668 303 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.84□□□□□ -1.63
DUSP9Q99956 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.84□□□□□ -1.63
DUSP9Q99956 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.84□□□□□ -1.63
DUSP9Q99956 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.84□□□□□ -1.63
DUSP9Q99956 AC007938.3-201ENST00000604965 623 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 AC091925.1-201ENST00000623204 462 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 AL078596.1-201ENST00000624856 447 ntBASIC4.84□□□□□ -1.63
DUSP9Q99956 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.84□□□□□ -1.63
DUSP9Q99956 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.84□□□□□ -1.63
DUSP9Q99956 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
DUSP9Q99956 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
DUSP9Q99956 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 OR5P1P-201ENST00000299512 925 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.83□□□□□ -1.64
DUSP9Q99956 RNU6-600P-201ENST00000362524 99 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 RNU6-1032P-201ENST00000384100 107 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 SNORA41-201ENST00000384675 132 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AL022722.2-201ENST00000402519 180 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AL030996.1-201ENST00000411430 235 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 RPEP3-201ENST00000425462 676 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AL627311.1-201ENST00000431514 115 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 Z82210.1-201ENST00000440037 231 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.83□□□□□ -1.64
DUSP9Q99956 RPL21P23-201ENST00000446654 460 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.83□□□□□ -1.64
DUSP9Q99956 ABCF2P2-201ENST00000450549 296 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 RPL7AP28-201ENST00000464513 571 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 RPS26P28-201ENST00000470806 348 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.83□□□□□ -1.64
DUSP9Q99956 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.83□□□□□ -1.64
DUSP9Q99956 PTP4A1P4-201ENST00000512479 322 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 SNORA25.10-201ENST00000515926 124 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 RNU6-264P-201ENST00000517134 104 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 Y_RNA.720-201ENST00000517166 92 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
DUSP9Q99956 AC136624.4-201ENST00000573044 370 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.83□□□□□ -1.64
DUSP9Q99956 AL645944.1-201ENST00000603857 493 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 AC106900.2-201ENST00000604994 317 ntBASIC4.83□□□□□ -1.64
DUSP9Q99956 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.83□□□□□ -1.64
DUSP9Q99956 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DUSP9Q99956 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.83□□□□□ -1.64
DUSP9Q99956 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
DUSP9Q99956 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
DUSP9Q99956 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.82□□□□□ -1.64
DUSP9Q99956 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.82□□□□□ -1.64
DUSP9Q99956 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
DUSP9Q99956 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.82□□□□□ -1.64
DUSP9Q99956 NCAPGP1-201ENST00000505112 1814 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 RNU1-108P-201ENST00000362556 161 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 SNORA62-201ENST00000365493 153 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 MIR3065-201ENST00000390137 79 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 SNORD66.1-201ENST00000391230 76 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 RNA5SP239-201ENST00000410218 129 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 Y_RNA.623-201ENST00000411128 95 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 RNU2-71P-201ENST00000411395 189 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.82□□□□□ -1.64
DUSP9Q99956 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.82□□□□□ -1.64
DUSP9Q99956 SYF2P2-201ENST00000417620 583 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.82□□□□□ -1.64
DUSP9Q99956 CECR9-201ENST00000453421 199 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 PPBPP1-201ENST00000510807 373 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 Y_RNA.661-201ENST00000516003 99 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 SCARNA16.2-201ENST00000516520 172 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DUSP9Q99956 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.82□□□□□ -1.64
DUSP9Q99956 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DUSP9Q99956 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
DUSP9Q99956 BNIP3P16-201ENST00000589779 534 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.82□□□□□ -1.64
DUSP9Q99956 AC079587.1-201ENST00000603846 277 ntBASIC4.82□□□□□ -1.64
DUSP9Q99956 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.82□□□□□ -1.64
DUSP9Q99956 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms