Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD3Q7Z3D4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AL031595.2-201ENST00000624215 19071 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-428P-201ENST00000362942 107 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 RN7SKP113-201ENST00000363891 295 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-1025P-201ENST00000410629 104 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AL035461.1-201ENST00000421490 332 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 DDX39BP1-205ENST00000422507 192 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AL358472.1-201ENST00000431295 329 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AC016700.2-201ENST00000446011 156 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 KNOP1P3-201ENST00000446933 426 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 BTF3P6-201ENST00000448054 499 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 SNORA27.4-201ENST00000516650 95 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 RNU7-110P-201ENST00000516891 62 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 RN7SKP272-201ENST00000516988 232 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AC060766.3-201ENST00000591442 263 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AC008121.1-201ENST00000603244 268 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD3Q7Z3D4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC009229.4-201ENST00000623854 1947 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AL445487.1-201ENST00000415694 1580 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 MIR412-201ENST00000362142 91 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-318P-201ENST00000384283 103 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 MIR585-201ENST00000384887 94 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 U3.32-201ENST00000408116 212 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RNU6-712P-201ENST00000410558 100 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RNU5A-5P-201ENST00000411054 116 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC093162.1-201ENST00000419682 124 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RPS6P12-201ENST00000432491 726 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC008267.6-201ENST00000441664 139 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RPL34P20-201ENST00000442771 351 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 snoU13.30-201ENST00000458951 104 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RNA5SP103-201ENST00000459503 118 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 HMGB3P16-201ENST00000508037 287 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RN7SKP260-201ENST00000516907 149 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 RPL7P50-201ENST00000600588 727 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC005046.1-201ENST00000608515 625 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 MIR6798-201ENST00000612887 67 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC090617.7-201ENST00000623952 126 ntBASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LYSMD3Q7Z3D4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.09□□□□□ -1.6
LYSMD3Q7Z3D4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LYSMD3Q7Z3D4 AC063976.2-201ENST00000425667 3556 ntBASIC5.09□□□□□ -1.6
LYSMD3Q7Z3D4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
LYSMD3Q7Z3D4 AC100821.1-201ENST00000523153 2479 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 STX3-208ENST00000641815 3236 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL451142.2-201ENST00000429076 2090 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC135776.4-201ENST00000624300 1904 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RNA5SP205-201ENST00000364653 136 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms