Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AL354798.1-201ENST00000622505 329 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 Z69720.2-201ENST00000624755 279 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 MIR4275-201ENST00000636486 87 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC066616.2-201ENST00000559334 1481 ntBASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40BQ6NWY9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL592437.2-201ENST00000421655 2434 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-1155P-201ENST00000363554 107 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 MIR7-3-201ENST00000384898 110 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 MIR153-1-201ENST00000384914 90 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RNU2-43P-201ENST00000410306 190 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-293P-201ENST00000411259 106 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RPL7P37-201ENST00000425095 738 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL669831.1-202ENST00000428504 417 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC096644.2-201ENST00000429278 159 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RPL23AP50-201ENST00000434149 455 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 MRPS18BP2-201ENST00000434310 759 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL731563.1-201ENST00000442202 214 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 PTMAP3-201ENST00000447474 330 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-953P-201ENST00000459154 107 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC110792.1-201ENST00000491826 472 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC026782.1-201ENST00000512952 449 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-1095P-201ENST00000516148 108 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC087854.1-201ENST00000519706 414 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC025423.5-201ENST00000550230 219 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC067852.3-201ENST00000589177 561 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC073539.2-201ENST00000597113 165 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC012669.1-201ENST00000603209 283 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL713922.2-201ENST00000619384 716 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 U4.1-201ENST00000620349 87 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 MIR7154-201ENST00000620673 73 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AC091953.5-201ENST00000622919 233 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL732372.2-225ENST00000642124 456 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 AL139811.1-201ENST00000424779 2299 ntBASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF40BQ6NWY9 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.47-201ENST00000362697 108 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-1249P-201ENST00000363237 111 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.176-201ENST00000363815 109 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.404-201ENST00000383978 102 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 RNY1P14-201ENST00000384426 108 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-306P-201ENST00000384617 107 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AL691449.1-201ENST00000426570 421 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 RPL21P23-201ENST00000446654 460 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AC073587.1-201ENST00000447093 876 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 RPS29P19-201ENST00000479709 171 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AC096745.1-201ENST00000509945 370 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 AL161670.1-201ENST00000554348 137 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 SDR42E1P2-201ENST00000614861 481 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 CDC27P3-201ENST00000635418 1910 ntBASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF40BQ6NWY9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.15□□□□□ -1.58
PRPF40BQ6NWY9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-490P-201ENST00000362985 107 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-288P-201ENST00000363690 104 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-702P-201ENST00000364982 107 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-356P-201ENST00000384140 107 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-837P-201ENST00000391056 108 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-712P-201ENST00000410558 100 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 AC080125.1-201ENST00000414888 684 ntBASIC5.15□□□□□ -1.59
PRPF40BQ6NWY9 SSXP9-201ENST00000417503 292 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms