Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MIR3609-201ENST00000582661 80 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 BNIP3P25-201ENST00000596023 559 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 AC073539.2-201ENST00000597113 165 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 VN1R80P-201ENST00000597126 338 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 AC104260.1-201ENST00000616660 539 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.62□□□□□ -1.83
SUMO3P55854 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 MTND4P12-201ENST00000498999 1377 ntBASIC3.62□□□□□ -1.83
SUMO3P55854 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.62□□□□□ -1.83
SUMO3P55854 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SUMO3P55854 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
SUMO3P55854 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.61□□□□□ -1.83
SUMO3P55854 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.61□□□□□ -1.83
SUMO3P55854 MIR412-201ENST00000362142 91 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 RNA5SP295-201ENST00000362655 121 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 RNA5SP399-201ENST00000364003 117 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 Y_RNA.480-201ENST00000384364 102 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 RNU1-13P-201ENST00000384499 162 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 RNA5SP219-201ENST00000390940 113 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 EIF4E2P1-201ENST00000393781 255 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 RNU6-1148P-201ENST00000410992 104 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.61□□□□□ -1.83
SUMO3P55854 AL353621.1-201ENST00000418219 243 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 USP9YP20-201ENST00000419224 558 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.61□□□□□ -1.83
SUMO3P55854 BRK1P2-201ENST00000442875 223 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.61□□□□□ -1.83
SUMO3P55854 RPL32P34-201ENST00000486380 400 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AC083904.1-201ENST00000487828 231 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 HMGB1P30-201ENST00000492455 606 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AC112206.3-201ENST00000514578 389 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 RN7SKP256-201ENST00000517201 314 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.61□□□□□ -1.83
SUMO3P55854 AC009902.1-201ENST00000519351 183 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.61□□□□□ -1.83
SUMO3P55854 YPEL5P3-201ENST00000547227 352 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 HIGD1AP1-201ENST00000550979 275 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.61□□□□□ -1.83
SUMO3P55854 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.61□□□□□ -1.83
SUMO3P55854 AC009248.2-201ENST00000619826 254 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.61□□□□□ -1.83
SUMO3P55854 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.61□□□□□ -1.83
SUMO3P55854 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 RLIMP1-201ENST00000339626 1680 ntBASIC3.61□□□□□ -1.83
SUMO3P55854 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SUMO3P55854 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SUMO3P55854 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.6□□□□□ -1.83
SUMO3P55854 SPRR2C-201ENST00000290702 219 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 SNORA32.2-201ENST00000384049 122 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RNU6-1179P-201ENST00000384667 107 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RPS4XP7-201ENST00000406274 780 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RNU4-6P-201ENST00000410804 122 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RNA5SP306-201ENST00000411087 107 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RNU6-607P-201ENST00000411283 108 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RPLP0P7-201ENST00000416050 667 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.6□□□□□ -1.83
SUMO3P55854 MYL8P-204ENST00000431574 518 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.6□□□□□ -1.83
SUMO3P55854 ATP5HP2-201ENST00000433885 485 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 IFNA20P-201ENST00000436840 528 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 USP9YP8-201ENST00000441913 500 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 SSXP4-201ENST00000451349 245 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RPL12P25-201ENST00000455592 494 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC010469.1-201ENST00000463864 576 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC139453.3-201ENST00000493276 369 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC091951.2-201ENST00000500762 203 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.6□□□□□ -1.83
SUMO3P55854 MTND3P25-201ENST00000509243 135 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 RNU6-875P-201ENST00000516488 106 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 BTF3P12-201ENST00000519620 469 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC090136.1-201ENST00000520009 240 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC087369.1-201ENST00000520775 996 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC025755.1-201ENST00000521306 278 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC107953.1-201ENST00000522216 297 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.6□□□□□ -1.83
SUMO3P55854 CYCSP27-201ENST00000527643 293 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC087241.2-201ENST00000535801 324 ntBASIC3.6□□□□□ -1.83
SUMO3P55854 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.6□□□□□ -1.83
SUMO3P55854 TRAV37-201ENST00000553906 342 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms