Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RNF144AP50876 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF144AP50876 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RNF144AP50876 MIR133B-201ENST00000362210 119 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 SNORD115-32-201ENST00000364079 82 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RN7SKP124-201ENST00000364730 341 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 Y_RNA.357-201ENST00000365487 109 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RNU6-1074P-201ENST00000383995 104 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 SNORA51.8-201ENST00000384234 132 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RNU6-541P-201ENST00000384709 110 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 Y_RNA.571-201ENST00000384753 98 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 SNORA17A-201ENST00000391185 133 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RNU6-257P-201ENST00000410238 98 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF144AP50876 AL391987.1-201ENST00000441025 200 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 NUTF2P7-201ENST00000453086 375 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 FABP5P15-201ENST00000453566 214 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 AC100832.1-201ENST00000471945 383 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RN7SL273P-201ENST00000481561 299 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RNA5SP228-201ENST00000516232 133 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 SNORD116-25-201ENST00000516517 92 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RN7SKP49-201ENST00000516675 260 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 RNU6-567P-201ENST00000516746 107 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 IGKV3D-34-201ENST00000522638 302 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF144AP50876 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF144AP50876 RN7SL290P-201ENST00000578661 300 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF144AP50876 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RNF144AP50876 AL359881.1-201ENST00000602916 267 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 AC244107.2-201ENST00000611773 76 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 AC005296.1-201ENST00000616145 209 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 SNORA17.5-201ENST00000630429 132 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RNF144AP50876 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF144AP50876 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF144AP50876 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF144AP50876 AL031595.2-201ENST00000624215 19071 ntBASIC4.96□□□□□ -1.62
RNF144AP50876 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RNF144AP50876 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
RNF144AP50876 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF144AP50876 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF144AP50876 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF144AP50876 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF144AP50876 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
RNF144AP50876 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RNF144AP50876 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
RNF144AP50876 Y_RNA.261-201ENST00000364631 102 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 Y_RNA.331-201ENST00000365267 102 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF144AP50876 OR1L6-202ENST00000373684 1044 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 MIR514A1-201ENST00000385133 98 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RNA5SP213-201ENST00000391031 106 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RAB9AP3-201ENST00000412737 573 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 SDHDP6-201ENST00000414693 480 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 AC091390.3-201ENST00000426478 338 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 COX6B1P7-201ENST00000430845 235 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 CKS1BP5-201ENST00000434172 273 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF144AP50876 AC009237.7-201ENST00000447357 229 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RAB9AP1-201ENST00000449393 573 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RPL23AP3-201ENST00000453844 468 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 snoU109.2-201ENST00000459316 135 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RPS4XP22-201ENST00000480755 780 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RN7SL466P-201ENST00000497546 295 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RNA5SP272-201ENST00000516095 111 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RNU6-919P-201ENST00000516731 104 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 SNORA31.19-201ENST00000517079 126 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 Y_RNA.719-201ENST00000517156 106 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 AL121603.1-201ENST00000553815 142 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF144AP50876 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF144AP50876 KLKP1-201ENST00000595979 403 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF144AP50876 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF144AP50876 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF144AP50876 AL691477.1-201ENST00000624398 162 ntBASIC4.95□□□□□ -1.62
RNF144AP50876 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF144AP50876 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF144AP50876 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF144AP50876 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF144AP50876 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF144AP50876 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF144AP50876 AC104623.2-202ENST00000623477 4002 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF144AP50876 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF144AP50876 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF144AP50876 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF144AP50876 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RNF144AP50876 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF144AP50876 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF144AP50876 RN7SKP224-201ENST00000364140 325 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 Y_RNA.230-201ENST00000364348 109 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 Y_RNA.245-201ENST00000364493 95 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 RNU6-312P-201ENST00000364629 107 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 SNORA68.2-201ENST00000391263 128 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 SNORA40C-201ENST00000391285 128 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF144AP50876 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.94□□□□□ -1.62
RNF144AP50876 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms