Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.86□□□□□ -1.63
THBS1P07996 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.86□□□□□ -1.63
THBS1P07996 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
THBS1P07996 RNU5A-1-201ENST00000362698 116 ntBASIC4.86□□□□□ -1.63
THBS1P07996 RNU6-153P-201ENST00000364422 104 ntBASIC4.86□□□□□ -1.63
THBS1P07996 RNA5SP223-201ENST00000365174 120 ntBASIC4.86□□□□□ -1.63
THBS1P07996 RNU6-44P-201ENST00000384045 107 ntBASIC4.86□□□□□ -1.63
THBS1P07996 RNU6-968P-201ENST00000384076 107 ntBASIC4.86□□□□□ -1.63
THBS1P07996 Y_RNA.571-201ENST00000384753 98 ntBASIC4.86□□□□□ -1.63
THBS1P07996 MIR10A-201ENST00000385043 110 ntBASIC4.86□□□□□ -1.63
THBS1P07996 RNA5SP296-201ENST00000410523 111 ntBASIC4.86□□□□□ -1.63
THBS1P07996 AC119751.6-201ENST00000416712 186 ntBASIC4.86□□□□□ -1.63
THBS1P07996 MTATP6P4-201ENST00000427725 675 ntBASIC4.86□□□□□ -1.63
THBS1P07996 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.86□□□□□ -1.63
THBS1P07996 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.86□□□□□ -1.63
THBS1P07996 snoU13.3-201ENST00000459441 104 ntBASIC4.86□□□□□ -1.63
THBS1P07996 IGLV2-28-201ENST00000520681 304 ntBASIC4.86□□□□□ -1.63
THBS1P07996 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.86□□□□□ -1.63
THBS1P07996 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.86□□□□□ -1.63
THBS1P07996 AL161798.1-201ENST00000604630 131 ntBASIC4.86□□□□□ -1.63
THBS1P07996 AC006001.4-201ENST00000622243 395 ntBASIC4.86□□□□□ -1.63
THBS1P07996 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.86□□□□□ -1.63
THBS1P07996 AC116096.1-201ENST00000566804 2314 ntBASIC4.86□□□□□ -1.63
THBS1P07996 AL034549.2-201ENST00000618285 3373 ntBASIC4.86□□□□□ -1.63
THBS1P07996 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.86□□□□□ -1.63
THBS1P07996 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
THBS1P07996 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
THBS1P07996 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
THBS1P07996 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.86□□□□□ -1.63
THBS1P07996 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
THBS1P07996 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 AC008079.2-201ENST00000623543 20396 ntBASIC4.85□□□□□ -1.63
THBS1P07996 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.85□□□□□ -1.63
THBS1P07996 RNU6-428P-201ENST00000362942 107 ntBASIC4.85□□□□□ -1.63
THBS1P07996 RNU5E-7P-201ENST00000365290 117 ntBASIC4.85□□□□□ -1.63
THBS1P07996 RNA5SP339-201ENST00000390987 122 ntBASIC4.85□□□□□ -1.63
THBS1P07996 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.85□□□□□ -1.63
THBS1P07996 TBCAP2-201ENST00000416175 326 ntBASIC4.85□□□□□ -1.63
THBS1P07996 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.85□□□□□ -1.63
THBS1P07996 AC024067.1-201ENST00000426199 223 ntBASIC4.85□□□□□ -1.63
THBS1P07996 CYCSP6-201ENST00000434498 302 ntBASIC4.85□□□□□ -1.63
THBS1P07996 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.85□□□□□ -1.63
THBS1P07996 SSXP4-201ENST00000451349 245 ntBASIC4.85□□□□□ -1.63
THBS1P07996 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 AC091179.1-201ENST00000461606 579 ntBASIC4.85□□□□□ -1.63
THBS1P07996 RN7SL547P-201ENST00000490793 290 ntBASIC4.85□□□□□ -1.63
THBS1P07996 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.85□□□□□ -1.63
THBS1P07996 SNORA40.9-201ENST00000515895 93 ntBASIC4.85□□□□□ -1.63
THBS1P07996 Y_RNA.719-201ENST00000517156 106 ntBASIC4.85□□□□□ -1.63
THBS1P07996 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.85□□□□□ -1.63
THBS1P07996 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.85□□□□□ -1.63
THBS1P07996 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 AC022968.1-201ENST00000567372 442 ntBASIC4.85□□□□□ -1.63
THBS1P07996 BPIFA4P-203ENST00000603168 689 ntBASIC4.85□□□□□ -1.63
THBS1P07996 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 AL360181.4-201ENST00000621752 134 ntBASIC4.85□□□□□ -1.63
THBS1P07996 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
THBS1P07996 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
THBS1P07996 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
THBS1P07996 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.84□□□□□ -1.63
THBS1P07996 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
THBS1P07996 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.84□□□□□ -1.63
THBS1P07996 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.84□□□□□ -1.63
THBS1P07996 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 RNU4-84P-201ENST00000364200 139 ntBASIC4.84□□□□□ -1.63
THBS1P07996 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
THBS1P07996 Y_RNA.446-201ENST00000384178 104 ntBASIC4.84□□□□□ -1.63
THBS1P07996 RNU6-146P-201ENST00000384602 108 ntBASIC4.84□□□□□ -1.63
THBS1P07996 MIR105-1-201ENST00000385222 81 ntBASIC4.84□□□□□ -1.63
THBS1P07996 SNORA40-201ENST00000388090 126 ntBASIC4.84□□□□□ -1.63
THBS1P07996 UBA52P6-201ENST00000399822 382 ntBASIC4.84□□□□□ -1.63
THBS1P07996 AC009804.1-201ENST00000400949 179 ntBASIC4.84□□□□□ -1.63
THBS1P07996 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.84□□□□□ -1.63
THBS1P07996 EIF1AXP1-201ENST00000419267 435 ntBASIC4.84□□□□□ -1.63
THBS1P07996 AL353705.4-201ENST00000449661 238 ntBASIC4.84□□□□□ -1.63
THBS1P07996 AL591623.2-201ENST00000449978 222 ntBASIC4.84□□□□□ -1.63
THBS1P07996 HSPE1P6-201ENST00000479457 291 ntBASIC4.84□□□□□ -1.63
THBS1P07996 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms