Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.78□□□□□ -1.48
RNF40O75150 BNIP3P5-201ENST00000562290 498 ntBASIC5.78□□□□□ -1.48
RNF40O75150 AC090616.3-201ENST00000582184 217 ntBASIC5.78□□□□□ -1.48
RNF40O75150 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF40O75150 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF40O75150 AC090607.5-201ENST00000615692 224 ntBASIC5.78□□□□□ -1.48
RNF40O75150 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF40O75150 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF40O75150 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF40O75150 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RNF40O75150 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF40O75150 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF40O75150 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RNF40O75150 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RNF40O75150 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF40O75150 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF40O75150 AL672167.1-205ENST00000641112 3080 ntBASIC5.77□□□□□ -1.49
RNF40O75150 AC104260.2-201ENST00000623551 3497 ntBASIC5.77□□□□□ -1.49
RNF40O75150 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF40O75150 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF40O75150 RNU6-275P-201ENST00000364910 107 ntBASIC5.77□□□□□ -1.49
RNF40O75150 Y_RNA.331-201ENST00000365267 102 ntBASIC5.77□□□□□ -1.49
RNF40O75150 RNA5SP30-201ENST00000365552 115 ntBASIC5.77□□□□□ -1.49
RNF40O75150 RNU1-77P-201ENST00000390868 162 ntBASIC5.77□□□□□ -1.49
RNF40O75150 AL645927.1-201ENST00000396783 406 ntBASIC5.77□□□□□ -1.49
RNF40O75150 AL513331.1-201ENST00000411908 397 ntBASIC5.77□□□□□ -1.49
RNF40O75150 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.77□□□□□ -1.49
RNF40O75150 CYCSP6-201ENST00000434498 302 ntBASIC5.77□□□□□ -1.49
RNF40O75150 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF40O75150 RN7SL329P-201ENST00000467740 299 ntBASIC5.77□□□□□ -1.49
RNF40O75150 RPL21P13-201ENST00000488305 481 ntBASIC5.77□□□□□ -1.49
RNF40O75150 AC231760.1-201ENST00000498002 260 ntBASIC5.77□□□□□ -1.49
RNF40O75150 SNORA25.12-201ENST00000516202 82 ntBASIC5.77□□□□□ -1.49
RNF40O75150 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF40O75150 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF40O75150 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF40O75150 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF40O75150 AL161798.1-201ENST00000604630 131 ntBASIC5.77□□□□□ -1.49
RNF40O75150 AC024940.4-201ENST00000605507 246 ntBASIC5.77□□□□□ -1.49
RNF40O75150 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF40O75150 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF40O75150 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.77□□□□□ -1.49
RNF40O75150 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF40O75150 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RNF40O75150 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF40O75150 AC093591.2-201ENST00000565254 3843 ntBASIC5.77□□□□□ -1.49
RNF40O75150 FAM91A3P-201ENST00000456826 2544 ntBASIC5.77□□□□□ -1.49
RNF40O75150 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF40O75150 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RNF40O75150 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
RNF40O75150 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RNF40O75150 AC112198.2-201ENST00000426589 6996 ntBASIC5.76□□□□□ -1.49
RNF40O75150 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF40O75150 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 AL079305.1-201ENST00000623159 3008 ntBASIC5.76□□□□□ -1.49
RNF40O75150 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF40O75150 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RNF40O75150 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF40O75150 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF40O75150 RNU6-263P-201ENST00000363811 107 ntBASIC5.76□□□□□ -1.49
RNF40O75150 Y_RNA.182-201ENST00000363880 111 ntBASIC5.76□□□□□ -1.49
RNF40O75150 RNU6-755P-201ENST00000364400 103 ntBASIC5.76□□□□□ -1.49
RNF40O75150 RNU4-17P-201ENST00000365598 141 ntBASIC5.76□□□□□ -1.49
RNF40O75150 MIR130A-201ENST00000385274 89 ntBASIC5.76□□□□□ -1.49
RNF40O75150 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF40O75150 RNU6-882P-201ENST00000391025 103 ntBASIC5.76□□□□□ -1.49
RNF40O75150 EBAG9P1-201ENST00000418955 543 ntBASIC5.76□□□□□ -1.49
RNF40O75150 RPL7AP49-201ENST00000429522 581 ntBASIC5.76□□□□□ -1.49
RNF40O75150 WARS2P1-201ENST00000429678 537 ntBASIC5.76□□□□□ -1.49
RNF40O75150 AL627311.1-201ENST00000431514 115 ntBASIC5.76□□□□□ -1.49
RNF40O75150 AL591438.1-201ENST00000433508 581 ntBASIC5.76□□□□□ -1.49
RNF40O75150 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF40O75150 IGHV5-78-201ENST00000450948 295 ntBASIC5.76□□□□□ -1.49
RNF40O75150 RN7SL808P-201ENST00000496066 299 ntBASIC5.76□□□□□ -1.49
RNF40O75150 AC072052.1-201ENST00000496556 306 ntBASIC5.76□□□□□ -1.49
RNF40O75150 AC091912.1-201ENST00000511351 248 ntBASIC5.76□□□□□ -1.49
RNF40O75150 RNU6-659P-201ENST00000516454 104 ntBASIC5.76□□□□□ -1.49
RNF40O75150 RNU6-143P-201ENST00000516942 93 ntBASIC5.76□□□□□ -1.49
RNF40O75150 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 AC004825.2-201ENST00000616634 455 ntBASIC5.76□□□□□ -1.49
RNF40O75150 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF40O75150 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF40O75150 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF40O75150 AC004817.4-201ENST00000602396 3625 ntBASIC5.76□□□□□ -1.49
RNF40O75150 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF40O75150 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF40O75150 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RNF40O75150 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RNF40O75150 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.75□□□□□ -1.49
RNF40O75150 AL360270.2-201ENST00000562952 5985 ntBASIC5.75□□□□□ -1.49
RNF40O75150 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.75□□□□□ -1.49
RNF40O75150 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms