Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPL30P13-201ENST00000418873 348 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 PNRC2P1-201ENST00000423940 420 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 RPL30P4-201ENST00000429309 333 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 RPS15AP5-201ENST00000436276 388 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 RPL23AP76-201ENST00000441860 458 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC092757.1-201ENST00000467293 467 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 HMGB1P36-201ENST00000487709 576 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 RNA5SP137-201ENST00000516833 135 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AL161670.1-201ENST00000554348 137 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AP001269.3-201ENST00000588718 329 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AP000403.1-201ENST00000603349 851 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC103810.8-201ENST00000607347 118 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC069294.1-201ENST00000608397 350 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC008498.1-201ENST00000613012 531 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AC108479.2-201ENST00000617314 601 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 AL445493.3-201ENST00000619568 477 ntBASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
TCRBV3S1A0A5B6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 RNU6-217P-201ENST00000384164 104 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 OR6C66P-201ENST00000414917 930 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MTND6P13-201ENST00000443510 523 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MTCO1P48-201ENST00000448024 1096 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AL096803.2-201ENST00000450032 677 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC114801.2-201ENST00000503825 781 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 FAM206BP-201ENST00000510179 541 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 RNU6-889P-201ENST00000517189 103 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AP002748.2-201ENST00000528671 348 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC233702.2-202ENST00000562547 291 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC022254.1-201ENST00000567857 235 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MIR3198-2-201ENST00000577868 80 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MIR4513-201ENST00000581077 86 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MIR4713-201ENST00000582691 75 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC022202.1-201ENST00000613515 211 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 AC007785.2-201ENST00000598627 1916 ntBASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TCRBV3S1A0A5B6 MIR26B-201ENST00000362251 77 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 HMGB1P17-201ENST00000403495 628 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 U6atac.2-201ENST00000408644 118 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 RNU2-47P-201ENST00000410649 186 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 PIGFP3-201ENST00000441918 722 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AP1S2P1-201ENST00000457344 379 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 RNA5SP165-201ENST00000517142 115 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AC084364.2-201ENST00000546924 395 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AC080013.4-201ENST00000607624 649 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 AC083865.1-201ENST00000636634 831 ntBASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
TCRBV3S1A0A5B6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 ZNF29P-201ENST00000225587 168 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 SNORA62.1-201ENST00000364287 154 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AL355615.1-201ENST00000406187 641 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 RNU2-43P-201ENST00000410306 190 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AL512637.2-201ENST00000431287 1256 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 MTCO1P31-201ENST00000506355 492 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC116337.1-201ENST00000509680 687 ntBASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.04□□□□□ -2.24
TCRBV3S1A0A5B6 AC107953.1-201ENST00000522216 297 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms