Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SNRPGP15-201ENST00000600149 222 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC131238.1-201ENST00000617135 328 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC009541.1-201ENST00000438279 2662 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 NEAT1-202ENST00000501122 22743 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-1301P-201ENST00000362724 104 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-78P-201ENST00000362897 107 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RNA5SP132-201ENST00000364725 118 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-290P-201ENST00000365212 101 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORD63-201ENST00000384262 68 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-937P-201ENST00000384325 106 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORA53-201ENST00000391141 249 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 U8.22-201ENST00000459141 133 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RPS26P21-201ENST00000475397 348 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 SEPT14P8-201ENST00000508026 178 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 AC010265.1-201ENST00000513509 211 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-496P-201ENST00000516145 99 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 AP006245.1-201ENST00000522549 120 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 AC006349.1-201ENST00000555526 235 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR3910-1-201ENST00000580936 111 ntBASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA11Q9Y5H2 BRAFP1-201ENST00000445336 2703 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AL450345.1-202ENST00000605741 3881 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC000123.3-201ENST00000624029 4975 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-527P-201ENST00000363425 104 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 RNA5SP242-201ENST00000364171 118 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-72P-201ENST00000384285 79 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORA67-201ENST00000384423 137 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC009238.2-201ENST00000431026 355 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 RPS29P10-201ENST00000439197 166 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 NUTF2P7-201ENST00000453086 375 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 snoU13.4-201ENST00000458916 104 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU7-120P-201ENST00000459334 63 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 BX510359.5-201ENST00000515651 304 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 RNA5SP464-201ENST00000516251 108 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AP002392.1-201ENST00000537692 208 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC090132.2-201ENST00000615881 347 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AC118658.2-201ENST00000618697 459 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR6837-201ENST00000620884 64 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 U6.99-201ENST00000637524 83 ntBASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA11Q9Y5H2 AL672167.1-204ENST00000641875 3017 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 SCARNA15-201ENST00000607520 4325 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RNA5SP90-201ENST00000364801 99 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RNU6-968P-201ENST00000384076 107 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 OR3A2-201ENST00000408891 1076 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 RN7SKP16-201ENST00000410180 299 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AL358453.1-201ENST00000422522 250 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 AC104333.2-201ENST00000422630 192 ntBASIC5.02□□□□□ -1.61
PCDHGA11Q9Y5H2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms