Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 LINC00888-204ENST00000487386 421 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 MRPS36P2-201ENST00000512569 299 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 UBTFL10-201ENST00000528532 562 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC078814.3-201ENST00000553036 491 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC009097.3-201ENST00000563557 1018 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC023824.2-201ENST00000566185 400 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 MIR3200-201ENST00000580767 85 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC135507.1-201ENST00000607214 561 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 MIR6840-201ENST00000611937 71 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 MIR7106-201ENST00000612419 65 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AL136981.2-201ENST00000617319 734 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC004944.1-201ENST00000517807 3059 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 RPL21P132-201ENST00000331267 462 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 RNU6-462P-201ENST00000362659 105 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 RNU6-157P-201ENST00000383957 107 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 RNU6-114P-201ENST00000384704 105 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 SNORA80E-201ENST00000384744 137 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 MIR320C1-201ENST00000408566 88 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 RNU4-72P-201ENST00000410754 173 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 MTND1P21-201ENST00000412991 285 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC091390.3-201ENST00000426478 338 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 MTND1P32-201ENST00000433043 938 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC138853.1-201ENST00000503549 823 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 SUMO2P6-201ENST00000505273 288 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC022447.3-201ENST00000506865 495 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 HMGN1P28-201ENST00000521340 364 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 DUXAP1-201ENST00000556632 463 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC013244.3-201ENST00000605614 388 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC023510.2-201ENST00000622162 746 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 AC017037.3-201ENST00000625016 472 ntBASIC2.76□□□□□ -1.97
SMC3Q9UQE7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMC3Q9UQE7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC016717.2-201ENST00000609089 5141 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 RN7SKP226-201ENST00000364912 300 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AL109755.1-201ENST00000401791 649 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 RNU6-516P-201ENST00000411381 104 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 PGBD4P3-201ENST00000440731 581 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC108938.1-201ENST00000451204 136 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 RPS20P20-201ENST00000460498 340 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 ISCA1P3-201ENST00000577104 373 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC007621.1-201ENST00000604544 437 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 RNU6-88P-201ENST00000606801 100 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AC006927.4-201ENST00000639187 543 ntBASIC2.75□□□□□ -1.97
SMC3Q9UQE7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.75□□□□□ -1.97
SMC3Q9UQE7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 DDX10P1-201ENST00000448545 1933 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 RNU6-433P-201ENST00000363216 104 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 RNU6-1214P-201ENST00000363650 109 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 RNA5SP68-201ENST00000363885 119 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 SNORA4.1-201ENST00000364263 144 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 MIR23A-201ENST00000385245 73 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 U3.37-201ENST00000408528 213 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 RNA5SP184-201ENST00000411071 108 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.74□□□□□ -1.97
SMC3Q9UQE7 TXNL1P1-201ENST00000429528 554 ntBASIC2.74□□□□□ -1.97
SMC3Q9UQE7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms